Detailed bioinformatics scripts and methods used in the NAM genome paper.
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Updated
Mar 2, 2022 - R
Detailed bioinformatics scripts and methods used in the NAM genome paper.
Code for design of diagnostic PCR primers, and metabarcoding markers.
Natural Language Search and Analysis of High Dimensional Genomic Data
High-throughput gene to knowledge mapping through massive integration of public sequencing data.
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
Explore biomolecular pathways in Reactome from the command-line or a Python script
Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
Scripts and procedures for detecting positively selected genes and codons in primates
A mosaic genome painting tool for plant genomes
This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the pathogen. The scientific community and governments of other countries are looking for actions along these lines. The United Kingdom recently established a research network for genomic studies of SARS-CoV-2Covid…
A Python script to map PDB ID + chain ID to UniProt ID.
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common methods.
A set of processes/pipelines for bioinformatics
Split multi fasta file into single fasta files
👨🔬 Analysis Pipelines and Useful Tools
A collection of useful bioinformatics scripts.
Filter for reads from taxa of interest using Kraken2/Centrifuge classification results.
Repo for running command line-based BLAST in Jupyter environment provided via Binder.
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