Scorecard Development in python, 评分卡

Optimal binning: monotonic binning with constraints. Support batch & stream optimal binning. Scorecard modelling and counterfactual explanations.

Assembly and binning of metagenomes

Scorecard Development in R, 评分卡

Find nearby 3D objects in constant time O(1).

✨🧬 Refined binning of metagenomic contigs using assembly graphs

A hybrid assembly and MAG recovery pipeline (and more!)

🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

pure Julia package for optimal histogram binning, based on piecewise constant model.

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes

An algorithm for creating user configurable, variable-precision sliding windows of time. Useful for binning time values in large collections of data.

A Community Tool for Transiting Exoplanet Science with the JWST & HST

☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

Improving genome bins through the combination of different binning programs

Bayesian histograms for estimation of binary rare event rates, with fully automated bin pruning 📊

BinaRena: Interactive Visualization and Binning of Metagenomic Contigs

Repository of our application for human-augmented binning

AMBER: Assessment of Metagenome BinnERs

Rapid and simple taxonomic profiling of genome and metagenome contigs