Computes Projected Thickness via Phase-Contrast Imaging Algorithm that uses the Transport of Intensity Equation (Paganin Phase Retrieval from Single Defocused Image).
Example application call: (This will be fleshed out more once I have all bugs fixed) xray_tie.exe input_folder_path outout_folder_path filename_prefix startNum endNum IinVal Mag defocus_distance mu delta pixel_size regularization_param
(Unit in mm where units are appropriate)
Example: xray_tie.exe [Path to this folder]\input [Path to this folder]\output xray_tie_input_ 0 14 1.0 1.0 30 0.00828 0.0001 .00325 0.1
TO BUILD THE PROJECT:
YOU MUST HAVE THE FOLLOWING PATH/SOFTWARE LIRBARIES TO BUILD:
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ARRAYFIRE v2.1 SET AF_PATH = PATH/TO/ARRAYFIRE/v2.1
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CUDA v6 and above SET CUDA_PATH = PATH/TO/CUDA/v6++