The simbenchmark repository includes the codes of evaluating the simulation methods tailored for single-cell and spatial transcriptome data. This project contains eight parts, which are named from Chunk1 (Preparation of datasets and methods) to Chunk8 (Data analysis).
| Chunk ID | Content | Link |
|---|---|---|
| Chunk1 | Preparation of datasets and simulation methods | ➡️️📋 |
| Chunk2 | Parameter estimation and data simulation | ️➡️️📋 |
| Chunk3 | Summarization of data properties from both datasets | ➡️📋 |
| Chunk4 | Accuracy evaluation | ➡️📋 |
| Chunk5 | Functionality evaluation | ➡️📋 |
| Chunk6 | Scalability evaluation | ➡️📋 |
| Chunk7 | Usability evaluation | ➡️📋 |
| Chunk8 | Data analysis for publication | ➡️📋 |