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GCB 1998: Cologne, Germany
- Proceedings of the German Conference on Bioinformatics, GCB 1998, University of Cologne, Germany, October 1998. Oxford University Press 1998
Lectures
- Alexander E. Kel, Olga V. Kel-Margoulis, Vladimir N. Babenko, Nikolay A. Kolchanov, Edgar Wingender:
Combinatorial identification of promoters induced upon immune cell activation. German Conference on Bioinformatics 1998 - Alvis Brazma, Inge Jonassen, Jaak Vilo, Esko Ukkonen:
Predicting gene regulatory elements from their expression data in the complete yeast genome. German Conference on Bioinformatics 1998 - Edgar Wingender, Xin Chen, T. Heinemeyer, Alexander E. Kel, Ines Liebich, T. Meinhardt:
A hierarchy of databases for modeling gene regulatory mechanisms. German Conference on Bioinformatics 1998 - Thomas Werner, Andreas Klingenhoff, Kornelie Frech, Kerstin Quandt:
Modular modeling correlates with functional promoter diversification of human MHC class I promoters although nucleotide sequence conservation is not correlated. German Conference on Bioinformatics 1998 - Michael Zuker:
[Invited Lecture] The other folding problem: Algorithms and thermodynamics for nucleic acid secondary structure. German Conference on Bioinformatics 1998 - Uta Bohnebeck, Werner Sälter, Tamás Horváth, Stefan Wrobel, Dietmar Blohm:
Measuring similarity of RNA structures by relational instance-based learning: A first step toward detecting RNA signal structures in silico. German Conference on Bioinformatics 1998 - Ralf Bundschuh, Terence Hwa:
Detectability of Sequence Homology by DNA Hybridization. German Conference on Bioinformatics 1998 - Gunnar von Heijne:
[Invited Lecture] Picking out membrane proteins. German Conference on Bioinformatics 1998 - Dmitrij Frishman, Andrey A. Mironov, Hans-Werner Mewes, Mikhail S. Gelfand:
Combining diverse evidence for gene recognition in completely sequenced bacterial genomes. German Conference on Bioinformatics 1998 - Christoph W. Sensen, Terry Gaasterland:
[Invited Lecture] Automated genome analysis using MAGPIE. German Conference on Bioinformatics 1998 - Steffen Möller, Ulf Leser, Wolfgang Fleischmann, Rolf Apweiler:
EDITtoTrEMBL: A distributed approach to high-quality automated protein sequence annotation. German Conference on Bioinformatics 1998 - Claire O'Donovan, Maria Jesus Martin, Eric Glémet, Jean-Jacques Codani, Rolf Apweiler:
Removing Redundancy in SWISS-PROT and TrEMBL. German Conference on Bioinformatics 1998 - Wolfgang Fleischmann, Steffen Möller, Alain Gateau, Rolf Apweiler:
A novel method for automatic and reliable functional annotation of proteins. German Conference on Bioinformatics 1998 - Eörs Szathmáry:
[Invited Lecture] The Evolution of Information storage and heredity. German Conference on Bioinformatics 1998 - Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov:
Sequence Periodicities in Complete Genomes Reflect Supercoiling. German Conference on Bioinformatics 1998 - Sean R. Eddy:
[Invited Lecture] Genome sequence analysis and profile hidden Markov models. German Conference on Bioinformatics 1998 - Thomas Dandekar, Stefan Schuster, Martijn A. Huynen, Peer Bork:
Pathway alignment: Application in the comparative analysis of glycolysis. German Conference on Bioinformatics 1998 - Dietmar Schomburg:
BRENDA, Enzyme Data for Metabolic pathways. German Conference on Bioinformatics 1998 - S. Lindek, R. Fritsch, Ernst H. K. Stelzer, José María Carazo, A. Engel, I. Fita, C. Henn, P. McNeil, David M. Shotton, J. Machtynger:
Biolmage, the database of biological microscopy data. German Conference on Bioinformatics 1998 - Jean-Stéphane Varré, Jean-Paul Delahaye, Eric Rivals:
The transformation distance: A dissimilarity measure based an movements of segments. German Conference on Bioinformatics 1998 - Knut Reinert, Hans-Peter Lenhof, Burkhard Morgenstern:
An exact solution for the Segment-to-Segment multiple sequence alignment problem. German Conference on Bioinformatics 1998 - Antje Krause, Pierre Nicodème, Marc Rehmsmeier, Martin Vingron:
Automatic clustering of large sequence databases. German Conference on Bioinformatics 1998 - Janet M. Thornton, Andrew C. R. Martin, Christine A. Orengo, Duncan Milburn, Roman A. Laskowski:
[Invited Lecture] Protein Folds and Functions. German Conference on Bioinformatics 1998 - Mark Gerstein:
[Invited Lecture] A Structural Census of Genomes: Comparing Bacterial, Eukaryotic, and Archaea Genomes in Terms of Protein Structure. German Conference on Bioinformatics 1998 - Manfred J. Sippl:
[Invited Lecture] Fold Recognition: Techniques, Applications, and Pitfalls. German Conference on Bioinformatics 1998 - Alexander Hinneburg, Daniel A. Keim, Wolfgang Brandt:
Detecting relationships between amino acid residue sequences and 3D protein structures based on a new class of rotamer libraries. German Conference on Bioinformatics 1998 - Finn Drabløs:
Clustering of non-polar contacts in proteins. German Conference on Bioinformatics 1998 - Rolf Backofen, Sebastian Will:
Structure prediction in an HP-type lattice with an extended alphabet. German Conference on Bioinformatics 1998 - Ruth Nussinov, Raquel Norel, Bilha Sandak, George Verbitsky, Haim J. Wolfson:
[Invited Lecture] Structural motifs in the interior and on the surfaces of protein monomers and at protein-protein interfaces. German Conference on Bioinformatics 1998 - Thomas Seidl, Gabi Kastenmüller, Hans-Peter Kriegel:
Similarity Search in 3D Protein Databases. German Conference on Bioinformatics 1998 - Matthias Rarey, Bernd Kramer, Thomas Lengauer:
Docking of hydrophobic ligands with interaction-based matching algorithms. German Conference on Bioinformatics 1998
Posters
Regulation
- Niels Grabe, Ralf Hofestädt:
A promoter model based on different combinations of binding sites. German Conference on Bioinformatics 1998
Nucleotide-Structure
- Dirk Evers, Michael Zuker:
European Mfold Server. German Conference on Bioinformatics 1998 - Christoph Schneider, Jürgen Sühnel:
Unrestrained molecular dynamics simulation of the FMN-RNA Aptamer complex. German Conference on Bioinformatics 1998 - Maria Brandl, Michael Meyer, Jürgen Sühnel:
Quantum chemical ab initio study on an unusual water-mediated uracil-cytosine base pair. German Conference on Bioinformatics 1998
Metabolic Pathways
- Ralf Hofestädt, Manuela Prüß, Uwe Scholz, Holger Urban:
The Metabolic Diseases DataBase (MDDB) - A Molecular Database Toolkit for the Detection of Inborne Errors. German Conference on Bioinformatics 1998 - Nicole Isermann, Wolfgang Wiechert:
Efficient Computer algebraic Methods to analyze carbon labeling experiments. German Conference on Bioinformatics 1998 - Ignacio Sánchez-Valdenebro, Thomas Pfeiffer, Juan Carlos Nuño, Francisco Montero, Stefan Schuster:
A structural approach to the analysis of metabolic networks illustrated with erythrocyte metabolism. German Conference on Bioinformatics 1998
Genome Information & Sequence Data
- Kaj Albermann, Jean Hani, S. Stocker, Alfred Zollner, Hans-Werner Mewes:
The MIPS Yeast Genome Database. German Conference on Bioinformatics 1998 - Yvonne J. K. Edwards, Martin C. Frith, Greg Elgar, Martin J. Bishop:
Theatre: A Novel Tool For The Comparative Investigation and Display of Evolutionary Diversity of Functional and Structural Features in DNA Sequences. German Conference on Bioinformatics 1998 - Greg Elgar, M. S. Clark, Yvonne J. K. Edwards, S. Meek, S. Smith, S. Umrania, S. Warner, WiIliams G, Martin J. Bishop:
Characterization of The Compact Model Genome of The Japanese Puffer Fish (Fugu rubripes) Using A Cosmid Sequence Scanning Approach. German Conference on Bioinformatics 1998 - Klaus F. X. Mayer, Christine M. Schüller, Larry Parnell:
A Statistical Analysis of the success of exon prediction algorithms on the Arabidopsis genome. German Conference on Bioinformatics 1998 - Uwe Ohler, Heinrich Niemann:
Stochastic Language Models for Content Based DNA Sequence Classification. German Conference on Bioinformatics 1998 - Chandra M. Sarkar, J. Flavio R. Ortigao, Ulf Gyllensten, Anthony J. Brookes:
HGBase, a database of intra-genic DNA sequence polymorphisms. German Conference on Bioinformatics 1998 - Ruben Schattevoy, J. Weber, André Rosenthal:
High Throughput Sequence Annotation Server. German Conference on Bioinformatics 1998 - Normann Strack, Hans-Werner Mewes:
An Object Oriented Approach to Data Handling and Semiautomatic Processing of cDNA Clones. German Conference on Bioinformatics 1998 - N. I. Akberova, A. Leontiev:
Context-free method of pattern recognition in the genetic texts. German Conference on Bioinformatics 1998 - Erich Bornberg-Bauer:
Computational approaches to identify Leucine Zippers. German Conference on Bioinformatics 1998 - Bastien Chevreux, Thomas Pfisterer, Thomas Wetter, Sándor Suhai:
Computer assisted editing of genomic sequences. German Conference on Bioinformatics 1998 - Darrell Conklin, Terry Farrah:
Protein motif recognition in DNA sequences containing indel errors. German Conference on Bioinformatics 1998 - Eivind Coward, Finn Drabløs:
A method for detecting periodic patterns in sequences. German Conference on Bioinformatics 1998 - Henning Hermjakob, Claire O'Donovan, Maria Jesus Martin, Fiona Lang, Rolf Apweiler:
SPTR: A comprehensive, non redundant and up-to-date view of the protein sequence world. German Conference on Bioinformatics 1998 - Andreas Kaps, Dirk Haase, Hans-Werner Mewes:
Developing a groupware system for annotating Protein Sequences Using Object Oriented Technology. German Conference on Bioinformatics 1998 - Philip Lijnzaad, Katarzyna Kruszewska, Nicole Redaschi, Patricia Rodriguez-Tomé:
A CORBA server for the EMBL Nucleotide Sequence Database: presentation of a first full implementation (EMCORBA v2). German Conference on Bioinformatics 1998 - Niels Mache, Paul Levi:
GENIO/frame - Frame Shift Analysis and Sequencing Error Detection of Eukaryotic CDS. German Conference on Bioinformatics 1998 - Niels Mache, Paul Levi:
GENIO/scan - EST Guided Identification of Genes in Human Genomic DNA. German Conference on Bioinformatics 1998 - Peter Sterk, Mary Ann Tuli:
The EMBL Nucleotide Sequence Database at the European Bioinformatics Institute (EBI): Data Acquisition. German Conference on Bioinformatics 1998 - Mary Ann Tuli, Peter Sterk:
The EMBL Nucleotide Sequence Database at the European Bioinformatics Institute (EBI): Sequence Similarity Searching & Database query/retrieval. German Conference on Bioinformatics 1998 - Olaf Weiss, Hanspeter Herzel:
Property Codes in Sets of Protein Sequences. German Conference on Bioinformatics 1998 - Norman A. Doggett, Jonathan Longmire, Alexander Schliep, David C. Torney:
Screening large clone libraries efficiently. German Conference on Bioinformatics 1998
Sequence Alignment and Homology
- Yvonne Kallberg, Hans Jörnvall, Bengt Persson:
Implementing the Boyer-Moore Algorithm. German Conference on Bioinformatics 1998 - Burkhard Morgenstern:
DIALIGN2: Improvement of the segment to segment approach to multiple sequence alignment. German Conference on Bioinformatics 1998 - Bengt Persson, Yvonne Kallberg, Erik Nordling, Jan-Olav Höög, Hans Jörnvall:
Studies on the evolution of short-chain and medium-chain dehydrogenases/reductases. German Conference on Bioinformatics 1998 - Heiko A. Schmidt, Martin Vingron:
pfastDNAml: Using Parallel Computing for Maximum Likelihood Phylogenetic Analysis. German Conference on Bioinformatics 1998 - Martin Ebeling, Peter Ernst, Mechthild Falkenhahn, Karl-Heinz Glatting, Agnes Hotz-Wagenblatt, A. Kühl, Ge Zhang, Sándor Suhai:
EST Clustering at GENIUSnet, the German EMBnet node. German Conference on Bioinformatics 1998
Protein Structure
- Brigitte Altenberg, Gerrit Vriend:
Molecular modelling and macromolecular visualisation with WHAT IF. German Conference on Bioinformatics 1998 - Sabine Dietmann, Cornelius Frömmel:
Prediction of neighboring secondary structure of molecular patches in proteins by artificial neural networks. German Conference on Bioinformatics 1998 - Christoph Gille, Andrean Goede, Robert Preissner, Cornelius Frömmel:
Atomic patch similarity as a criterion of evolutionary relationship between proteins. German Conference on Bioinformatics 1998 - Andrean Goede, Robert Preissner, Cornelius Frömmel:
A procedure for superposition of two arbitrary atomic arrangements. German Conference on Bioinformatics 1998 - Robert Günther, Kerstin Möhle, Hans-Jörg Hofmann:
Secondary structure formation in beta-Peptides. German Conference on Bioinformatics 1998 - Jukka V. Lehtonen, Konstantin A. Denessiouk, Mark S. Johnson:
An application of genetic algorithm and parallel computing method to the protein structure comparison problem. German Conference on Bioinformatics 1998 - Oliver Leven, Dietmar Schomburg:
Prediction of Protein Thermostability. German Conference on Bioinformatics 1998 - Qianning Liao, Jingchu Luo, Songping Liang, Xiaocheng Gu:
A structural motif of three disulfide bridges and three beta strands in peptides. German Conference on Bioinformatics 1998 - Michael Meyer, Maria Brandl, Jürgen Sühnel:
C-H..0 interactions in proteins and protein complexes. German Conference on Bioinformatics 1998 - Ulrich Schieborr:
Dynamics in a time averaged stochastic dynamic simulation compared to essential dynamic methods applied to ribonuclease T1. German Conference on Bioinformatics 1998 - Fuad Abdallah, Olav Zimmermann, Oliver Leven, Sebastian Schneckener, Jan Kim:
A Relational Macromolecular Structure Database. German Conference on Bioinformatics 1998
Docking
- Peter Krämer, Dietmar Schomburg:
Use of local intermolecular interactions for the prediction of protein/protein binding sites. German Conference on Bioinformatics 1998 - Olav Zimmermann, Oliver Martin, Dietmar Schomburg:
Geometric Docking of Transmembrane Structures. German Conference on Bioinformatics 1998 - Erik Nordling, Udo C. T. Oppermann, Hanns-Ulrich Marschall, Hans Jörnvall, Bengt Persson:
Docking of bile acids to [gamma][gamma]alcohol dehydrogenase. German Conference on Bioinformatics 1998 - Robert Preissner, Andrean Goede, Cornelius Frömmel:
Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patches. German Conference on Bioinformatics 1998 - Michael Thormann, Hans-Jörg Hofmann:
Docking experiences, AutoDock - a Case Study. German Conference on Bioinformatics 1998
Others
- Markus Fischer, Christoph Kaiser, Jürgen Pleiss, Rolf D. Schmid:
Lipase Engineering Database. German Conference on Bioinformatics 1998 - Markus Kieninger, J. Gohrke, Chandra M. Sarkar, J. Flavio R. Ortigao, Thomas Kämpke:
DoPrimer - a modular object oriented application and Java class library for the design of oligonucleotide primers. German Conference on Bioinformatics 1998 - Manuel Ruiz, Gérard Mennessier, Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc:
IMGT/Collier de Perles, a LIGM-DB tool for Immunoglobulin and T-Cell Receptor 2D representations. German Conference on Bioinformatics 1998 - M. Schilling, Christoph Grunau, André Rosenthal:
MethDB - a relational DNA-Methylation-Database. German Conference on Bioinformatics 1998 - Jingchu Luo, Christoph W. Sensen, Tin Wee Tan:
Asia Pacific Bioinformatics Network. German Conference on Bioinformatics 1998
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