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Matthew H. Brush
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2020 – today
- 2022
- [j11]Nicolas Matentzoglu
, James P. Balhoff
A Simple Standard for Sharing Ontological Mappings (SSSOM). Database J. Biol. Databases Curation 2022(2022) (2022) - [i4]Deepak R. Unni, Sierra A. T. Moxon, Michael Bada, Matthew H. Brush, Richard M. Bruskiewich, Paul A. Clemons, Vlado Dancík, Michel Dumontier, Karamarie Fecho, Gustavo Glusman
Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science. CoRR abs/2203.13906 (2022) - 2021
- [j10]Randi Vita
Standardization of assay representation in the Ontology for Biomedical Investigations. Database J. Biol. Databases Curation 2021 (2021) - [c11]Sierra A. T. Moxon, Harold Solbrig, Deepak R. Unni, Dazhi Jiao, Richard M. Bruskiewich, James P. Balhoff, Gaurav Vaidya, William D. Duncan, Harshad Hegde, Mark Miller, Matthew H. Brush, Nomi L. Harris, Melissa A. Haendel, Christopher J. Mungall:
The Linked Data Modeling Language (LinkML): A General-Purpose Data Modeling Framework Grounded in Machine-Readable Semantics. ICBO 2021: 148-151 - [i3]Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall:
A Simple Standard for Sharing Ontological Mappings (SSSOM). CoRR abs/2112.07051 (2021) - 2020
- [j9]Kent A. Shefchek
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. Nucleic Acids Res. 48(Database-Issue): D704-D715 (2020)
2010 – 2019
- 2019
- [j8]Jean-Philippe F. Gourdine
Representing glycophenotypes: semantic unification of glycobiology resources for disease discovery. Database J. Biol. Databases Curation 2019: baz114 (2019) - [i2]Kristi L. Holmes
Architecting Attribution: expanding the scope of academic credit. RO 2019 - 2018
- [c10]Jean-Philippe F. Gourdine, Nicole A. Vasilevsky, Lilly Winfree, Matthew H. Brush, Melissa A. Haendel:
Expanding the Molecular Glycophenotype Ontology to include model organisms and acquired diseases. ICBO 2018 - 2017
- [j7]Violeta Ilik
OpenVIVO: Transparency in Scholarship. Frontiers Res. Metrics Anal. 2: 12 (2017) - [j6]Christopher J. Mungall, Julie A. McMurry
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species. Nucleic Acids Res. 45(Database-Issue): D712-D722 (2017) - [c9]James P. Balhoff, Matthew H. Brush, Laura Christopherson, Sherri de Coronado, Gilberto Fragoso, Melissa A. Haendel, Christopher J. Mungall, Kimberly Robasky, Nicole A. Vasilevsky, Lawrence W. Wright:
Tailoring the NCI Thesaurus for Use in The OBO Library. ICBO 2017 - 2016
- [j5]Alexander D. Diehl
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability. J. Biomed. Semant. 7: 44 (2016) - [j4]Anita E. Bandrowski
The Resource Identification Initiative: A Cultural Shift in Publishing. Neuroinformatics 14(2): 169-182 (2016) - [c8]Matthew H. Brush, Kent A. Shefchek, Melissa A. Haendel:
SEPIO: A Semantic Model for the Integration and Analysis of Scientific Evidence. ICBO/BioCreative 2016 - [c7]Marcus C. Chibucos, Suvarna Nadendla, James B. Munro, Elvira Mitraka, Dustin Olley, Nicole A. Vasilevsky, Matthew H. Brush, Michelle G. Giglio:
Supporting Database Annotations and Beyond with the Evidence & Conclusion Ontology (ECO). ICBO/BioCreative 2016 - [c6]Jean-Philippe F. Gourdine, Thomas O. Metz, David Koeller, Matthew H. Brush, Melissa A. Haendel:
Building a Molecular Glyco-phenotype Ontology to Decipher Undiagnosed Diseases. ICBO/BioCreative 2016 - [c5]Marijane White, Matthew H. Brush, Shahim Essaid, Robin Champieux, Adrienne Zell, Melissa A. Haendel, Colin Grove, Syeda Momina Tabish, David Eichmann:
Enhancing SciENcv through Semantic Research Profile Integration with the VIVO-ISF Ontology. ICBO/BioCreative 2016 - 2015
- [j3]Christopher Ochs, Yehoshua Perl, James Geller, Melissa A. Haendel, Matthew H. Brush
Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network. J. Biomed. Informatics 56: 127-144 (2015) - [i1]Anita E. Bandrowski
The Resource Identification Initiative: A cultural shift in publishing. F1000Research 4: 134 (2015) - 2014
- [j2]Sirarat Sarntivijai
CLO: The cell line ontology. J. Biomed. Semant. 5: 37 (2014) - 2013
- [c4]Matthew H. Brush, Chris Mungall, Nicole L. Washington, Melissa A. Haendel:
What's in a Genotype?: An Ontological Characterization for Integration of Genetic Variation Data. ICBO 2013: 105-108 - [c3]Matthew H. Brush, Jie Zheng, Yongqun He, Sirarat Sarntivijai, Bjoern Peters, Alexander D. Diehl, Christian J. Stoeckert Jr., Melissa A. Haendel:
Alignment of Cultured Cell Modeling Across OBO Foundry Ontologies: Key Outcomes, Insights. ICBO 2013: 120 - 2012
- [j1]Nicole A. Vasilevsky
Research resources: curating the new eagle-i discovery system. Database J. Biol. Databases Curation 2012 (2012) - 2011
- [c2]Matthew H. Brush, Nicole A. Vasilevsky, Carlo Torniai, Tenille Johnson, Chris Shaffer, Melissa A. Haendel:
Developing a Reagent Application Ontology within the OBO Foundry Framework. ICBO 2011 - [c1]Carlo Torniai, Matthew H. Brush, Nicole A. Vasilevsky, Erik Segerdell, Melanie Wilson, Tenille Johnson, Karen Corday, Chris Shaffer, Melissa A. Haendel:
Developing an Application Ontology for Biomedical Resource Annotation and Retrieval: Challenges and Lessons Learned. ICBO 2011
Coauthor Index
aka: Melissa Anne Haendel
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