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Alberto M. R. Dávila
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2020 – today
- 2021
- [j8]Maria Luiza Machado Campos, Eugênio Silva, Renato Cerceau, Sérgio Manuel Serra da Cruz, Fabrício Alves Barbosa da Silva, Fábio Castro Gouveia, Rodrigo Jardim, Nelson Kotowski, Giseli Rabello Lopes, Alberto M. R. Dávila:
Towards Machine-Readable (Meta) Data and the FAIR Value for Artificial Intelligence Exploration of COVID-19 and Cancer Research Data. Frontiers Big Data 4: 656553 (2021)
2010 – 2019
- 2017
- [j7]Marcelo Rodrigo de Castro, Catherine dos Santos Tostes, Alberto M. R. Dávila, Hermes Senger, Fabrício Alves Barbosa da Silva:
SparkBLAST: scalable BLAST processing using in-memory operations. BMC Bioinform. 18(1): 318 (2017) - [j6]Abel Carrión, Miguel Caballer, Ignacio Blanquer, Nelson Kotowski, Rodrigo Jardim, Alberto M. R. Dávila:
Managing workflows on top of a cloud computing orchestrator for using heterogeneous environments on e-Science. Int. J. Web Grid Serv. 13(4): 375-402 (2017) - 2012
- [c6]Edgar Sarmiento, Karin K. Breitman, Alberto M. R. Dávila, José Viterbo:
A framework for readapting and running bioinformatics applications in the cloud. RACS 2012: 86-91 - 2011
- [j5]Fábio Coutinho, Eduardo S. Ogasawara, Daniel de Oliveira, Vanessa Braganholo, Alexandre A. B. Lima, Alberto M. R. Dávila, Marta Mattoso:
Many task computing for orthologous genes identification in protozoan genomes using Hydra. Concurr. Comput. Pract. Exp. 23(17): 2326-2337 (2011) - [c5]Hugo Saldanha, Edward de Oliveira Ribeiro, Maristela Holanda, Aletéia P. F. Araújo, Genaína Nunes Rodrigues, Maria Emília Telles Walter, João Carlos Setubal, Alberto M. R. Dávila:
A Cloud Architecture for Bioinformatics Workflows. CLOSER 2011: 477-483 - [c4]Kary A. C. S. Ocaña, Daniel de Oliveira, Eduardo S. Ogasawara, Alberto M. R. Dávila, Alexandre A. B. Lima, Marta Mattoso:
SciPhy: A Cloud-Based Workflow for Phylogenetic Analysis of Drug Targets in Protozoan Genomes. BSB 2011: 66-70 - 2010
- [j4]Sérgio Manuel Serra da Cruz, Vanessa Batista, Edno Silva, Frederico Tosta, Clarissa Vilela, Rafael R. C. Cuadrat, Diogo A. Tschoeke, Alberto M. R. Dávila, Maria Luiza Machado Campos, Marta Mattoso:
Detecting distant homologies on protozoans metabolic pathways using scientific workflows. Int. J. Data Min. Bioinform. 4(3): 256-280 (2010) - [c3]Fábio Coutinho, Eduardo S. Ogasawara, Daniel de Oliveira, Vanessa Braganholo, Alexandre A. B. Lima, Alberto M. R. Dávila, Marta Mattoso:
Data parallelism in bioinformatics workflows using Hydra. HPDC 2010: 507-515
2000 – 2009
- 2008
- [j3]Alberto M. R. Dávila, Pablo N. Mendes, Glauber Wagner, Diogo A. Tschoeke, Rafael R. C. Cuadrat, Felipe Liberman, Luciana Matos, Thiago S. Satake, Kary A. C. S. Ocaña, Omar Triana, Sérgio Manuel Serra da Cruz, Henrique C. L. Jucá, Juliano C. Cury, Fabrício Nogueira da Silva, Guilherme A. Geronimo, Margarita Ruiz, Eduardo Ruback, Floriano P. Silva Jr., Christian M. Probst, Edmundo C. Grisard, Marco A. Krieger, Samuel Goldenberg, Maria Cláudia Reis Cavalcanti, Milton O. Moraes, Maria Luiza Machado Campos, Marta Mattoso:
ProtozoaDB: dynamic visualization and exploration of protozoan genomes. Nucleic Acids Res. 36(Database-Issue): 547-552 (2008) - [c2]Sérgio Manuel Serra da Cruz, Vanessa Batista, Alberto M. R. Dávila, Edno Silva, Frederico Tosta, Clarissa Vilela, Maria Luiza Machado Campos, Rafael R. C. Cuadrat, Diogo A. Tschoeke, Marta Mattoso:
OrthoSearch: a scientific workflow approach to detect distant homologies on protozoans. SAC 2008: 1282-1286 - 2007
- [j2]Juliana S. Bernardes, Alberto M. R. Dávila, Vítor Santos Costa, Gerson Zaverucha:
Improving model construction of profile HMMs for remote homology detection through structural alignment. BMC Bioinform. 8 (2007) - [i1]Juliana S. Bernardes, Alberto M. R. Dávila, Vítor Santos Costa, Gerson Zaverucha:
A study of structural properties on profiles HMMs. CoRR abs/0704.2010 (2007) - 2006
- [c1]Fabrício Nogueira da Silva, Maria Cláudia Cavalcanti, Alberto M. R. Dávila:
In Services: Data Management for In Silico Workflows. DEXA Workshops 2006: 206-210 - 2005
- [j1]Alberto M. R. Dávila, Daniel M. Lorenzini, Pablo N. Mendes, Thiago S. Satake, Gabriel R. Sousa, Linair Maria Campos, Camila J. Mazzoni, Glauber Wagner, Paulo F. Pires, Edmundo C. Grisard, Maria Cláudia Reis Cavalcanti, Maria Luiza Machado Campos:
GARSA: genomic analysis resources for sequence annotation. Bioinform. 21(23): 4302-4303 (2005)
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