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Mélanie Courtot
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2020 – today
- 2023
- [j18]Fuqi Xu
, Nick S. Juty, Carole A. Goble, Simon Jupp, Helen E. Parkinson
Features of a FAIR vocabulary. J. Biomed. Semant. 14(1): 6 (2023) - 2022
- [j17]Isuru Udara Liyanage, Tony Burdett
ELIXIR biovalidator for semantic validation of life science metadata. Bioinform. 38(11): 3141-3142 (2022) - [j16]Mélanie Courtot
BioSamples database: FAIRer samples metadata to accelerate research data management. Nucleic Acids Res. 50(D1): 1500-1507 (2022) - [c13]Fuqi Xu, Nick S. Juty, Carole A. Goble, Simon Jupp, Helen E. Parkinson, Mélanie Courtot:
Features of a FAIR Vocabulary. SWAT4HCLS 2022: 118-148 - 2021
- [j15]Rebecca C. Jackson
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies. Database J. Biol. Databases Curation 2021 (2021) - [j14]Peter W. Harrison
The European Nucleotide Archive in 2020. Nucleic Acids Res. 49(Database-Issue): D82-D85 (2021) - 2020
- [j13]Annika Jacobsen, Ricardo de Miranda Azevedo
FAIR Principles: Interpretations and Implementation Considerations. Data Intell. 2(1-2): 10-29 (2020)
2010 – 2019
- 2019
- [j12]Mélanie Courtot
BioSamples database: an updated sample metadata hub. Nucleic Acids Res. 47(Database-Issue): D1172-D1178 (2019) - [c12]Henriette Harmse, Mélanie Courtot, Warren Read, Nicolas Matentzoglu, David Osumi-Sutherland, Simon Jupp:
Where Does an Ontology Start? ICBO 2019: 1 - 2018
- [j11]David Osumi-Sutherland
Using OWL reasoning to support the generation of novel gene sets for enrichment analysis. J. Biomed. Semant. 9(1): 10:1-10:10 (2018) - 2017
- [j10]David Osumi-Sutherland
Dead simple OWL design patterns. J. Biomed. Semant. 8(1): 18:1-18:7 (2017) - [j9]Edison Ong
Ontobee: A linked ontology data server to support ontology term dereferencing, linkage, query and integration. Nucleic Acids Res. 45(Database-Issue): D347-D352 (2017) - [j8]Baofeng Jia, Amogelang R. Raphenya, Brian P. Alcock
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database. Nucleic Acids Res. 45(Database-Issue): D566-D573 (2017) - 2016
- [j7]Sefa Kiliç, Dinara M. Sagitova, Shoshannah Wolfish, Benoit Bely
From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF. Database J. Biol. Databases Curation 2016 (2016) - [c11]Mélanie Courtot, James Malone, Chris Mungall:
Ten Simple Rules for Biomedical Ontology Development. ICBO/BioCreative 2016 - [c10]Mélanie Courtot, Alex L. Mitchell, Maxim Scheremetjew, Janet Piñero González, Laura I. Furlong, Robert D. Finn, Helen E. Parkinson:
Slim-o-matic: a Semi-Automated Way to Generate Gene Ontology Slims. SWAT4LS 2016 - 2015
- [j6]Mélanie Courtot
flowCL: ontology-based cell population labelling in flow cytometry. Bioinform. 31(8): 1337-1339 (2015) - [c9]David Osumi-Sutherland, Enrico Ponta, Mélanie Courtot, Helen E. Parkinson, Laura Badi:
Cell, Chemical and Anatomical Views of the Gene Ontology: Mapping to a Roche Controlled Vocabulary. SWAT4LS 2015: 84-93 - [c8]Mélanie Courtot, Aleksandra Shypitsyna, Elena Speretta, Alexander Holmes, Tony Sawford, Tony Wardell, Maria Jesus Martin, Claire O'Donovan:
UniProt-GOA: A Central Resource for Data Integration and GO Annotation. SWAT4LS 2015: 227-228 - 2013
- [c7]Mélanie Courtot, Jie Zheng, Christian J. Stoeckert Jr., Ryan Remy Brinkman, Alan Ruttenberg:
Diagnostic criteria and clinical guidelines standardization to automate case classification. ICBO 2013: 101-104 - 2012
- [c6]Mélanie Courtot:
Knowledge representation in Health Research: the modeling of Adverse Events Following Immunization. ICBO 2012 - [c5]Mélanie Courtot, Ryan Remy Brinkman, Alan Ruttenberg:
Adverse events following immunization: reporting standardization, automatic case classification and signal detection. ICBO 2012 - 2011
- [j5]Philippe Rocca-Serra, Alan Ruttenberg
Overcoming the ontology enrichment bottleneck with Quick Term Templates. Appl. Ontology 6(1): 13-22 (2011) - [j4]Mélanie Courtot
MIREOT: The minimum information to reference an external ontology term. Appl. Ontology 6(1): 23-33 (2011) - [c4]Mélanie Courtot, Ryan Remy Brinkman:
Towards an Adverse Event Reporting Ontology. ICBO 2011 - [c3]Mélanie Courtot, Ryan Remy Brinkman, Alan Ruttenberg:
Reporting Adverse Events: Basis for a Common Representation. ICBO 2011 - [c2]Mélanie Courtot, Chris Mungall, Ryan Remy Brinkman, Alan Ruttenberg:
Building the OBO Foundry - One Policy at a Time. ICBO 2011 - [e1]Michel Dumontier, Mélanie Courtot:
Proceedings of the 8th International Workshop on OWL: Experiences and Directions (OWLED 2011), San Francisco, California, USA, June 5-6, 2011. CEUR Workshop Proceedings 796, CEUR-WS.org 2011 [contents] - 2010
- [j3]Chen Li
BioModels.net Web Services, a free and integrated toolkit for computational modelling software. Briefings Bioinform. 11(3): 270-277 (2010) - [j2]Ryan Remy Brinkman, Mélanie Courtot, Dirk Derom, Jennifer Fostel, Yongqun He, Phillip W. Lord, James Malone, Helen E. Parkinson, Björn Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Larisa N. Soldatova, Christian J. Stoeckert Jr., Jessica A. Turner, Jie Zheng, et al.:
Modeling biomedical experimental processes with OBI. J. Biomed. Semant. 1(S-1): S7 (2010)
2000 – 2009
- 2008
- [c1]Mélanie Courtot, William J. Bug, Frank Gibson, Allyson L. Lister, James Malone, Daniel Schober, Ryan Remy Brinkman, Alan Ruttenberg:
The OWL of Biomedical Investigations. OWLED 2008 - 2006
- [j1]Nicolas Le Novère, Benjamin J. Bornstein, Alexander Broicher, Mélanie Courtot
BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. Nucleic Acids Res. 34(Database-Issue): 689-691 (2006)
Coauthor Index
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