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Joe Wandy

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affiliation: Metabolon, UK
affiliation (former): University of Glasgow, UK

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2020 – today

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2022
[j9]
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  - journals/jossw/WandyDMWRD22
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Joe Wandy, Vinny Davies, Ross McBride, Stefan Weidt, Simon Rogers, Rónán Daly:
ViMMS 2.0: A framework to develop, test and optimise fragmentation strategies in LC-MS metabolomics. J. Open Source Softw. 7(71): 3990 (2022)
2021
[j8]
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  - journals/bmcbi/WandyD21
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Joe Wandy, Rónán Daly:
GraphOmics: an interactive platform to explore and integrate multi-omics data. BMC Bioinform. 22(1): 603 (2021)
[j7]
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  - journals/cstat/NiuWDRH21
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Mu Niu, Joe Wandy, Rónán Daly, Simon Rogers, Dirk Husmeier:
R package for statistical inference in dynamical systems using kernel based gradient matching: KGode. Comput. Stat. 36(1): 715-747 (2021)
[j6]
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  - journals/ploscb/EldjarnRHDSRDWR21
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Grímur Hjörleifsson Eldjárn, Andrew Ramsay, Justin J. J. van der Hooft, Katherine R. Duncan, Sylvia Soldatou, Juho Rousu, Rónán Daly, Joe Wandy, Simon Rogers:
Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions. PLoS Comput. Biol. 17(5) (2021)

2010 – 2019

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2018
[j5]
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  - journals/bioinformatics/WandyZHDBR18
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Joe Wandy, Yunfeng Zhu, Justin J. J. van der Hooft, Rónán Daly, Michael P. Barrett, Simon Rogers:
Ms2lda.org: web-based topic modelling for substructure discovery in mass spectrometry. Bioinform. 34(2): 317-318 (2018)
[j4]
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  - journals/bioinformatics/WandyNGDRH18
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Joe Wandy, Mu Niu, Diana Giurghita, Rónán Daly, Simon Rogers, Dirk Husmeier:
ShinyKGode: an interactive application for ODE parameter inference using gradient matching. Bioinform. 34(13): 2314-2315 (2018)
2017
[b1]
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Joe Wandy:
Unsupervised Bayesian explorations of mass spectrometry data. University of Glasgow, UK, 2017
[j3]
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  - journals/bioinformatics/GloaguenMDGRWWB17
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Yoann Gloaguen, Fraser R. Morton, Rónán Daly, Ross Gurden, Simon Rogers, Joe Wandy, David Wilson, Michael P. Barrett, Karl E. V. Burgess:
PiMP my metabolome: an integrated, web-based tool for LC-MS metabolomics data. Bioinform. 33(24): 4007-4009 (2017)
2015
[j2]
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  - journals/bioinformatics/WandyDBR15
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Joe Wandy, Rónán Daly, Rainer Breitling, Simon Rogers:
Incorporating peak grouping information for alignment of multiple liquid chromatography-mass spectrometry datasets. Bioinform. 31(12): 1999-2006 (2015)
2014
[j1]
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  - journals/bioinformatics/DalyRWJBB14
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Rónán Daly, Simon Rogers, Joe Wandy, Andris Jankevics, Karl E. V. Burgess, Rainer Breitling:
MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach. Bioinform. 30(19): 2764-2771 (2014)

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