A new class of retroviral and satellite encoded small RNAs emanates from mammalian centromeres (Q82224945)

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scientific article published on 07 October 2008

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English	A new class of retroviral and satellite encoded small RNAs emanates from mammalian centromeres	scientific article published on 07 October 2008

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18839199

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title

A new class of retroviral and satellite encoded small RNAs emanates from mammalian centromeres (English)

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18839199

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Dawn M Carone

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1

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PubMed publication ID

18839199

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15 January 2020

Mark S Longo

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2

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18839199

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Gianni C Ferreri

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3

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18839199

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Laura Hall

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4

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18839199

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Melissa Harris

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5

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18839199

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Nicole Shook

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6

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18839199

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15 January 2020

Kira V Bulazel

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7

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18839199

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Benjamin R Carone

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8

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18839199

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Craig Obergfell

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9

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18839199

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15 January 2020

Michael J O'Neill

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10

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18839199

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15 January 2020

Rachel J O'Neill

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11

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18839199

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publication date

7 October 2008

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18839199

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15 January 2020

published in

Chromosoma

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PubMed publication ID

18839199

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15 January 2020

volume

118

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18839199

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15 January 2020

issue

1

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18839199

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15 January 2020

page(s)

113-125

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18839199

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15 January 2020

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A centromere-specific retroviral element associated with breaks of synteny in macropodine marsupials

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Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila

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Species-specific shifts in centromere sequence composition are coincident with breakpoint reuse in karyotypically divergent lineages

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

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Small RNAs just got bigger: Piwi-interacting RNAs (piRNAs) in mammalian testes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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A molecular view of plant centromeres

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12 December 2020

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Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid

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Delineation of individual human chromosomes in metaphase and interphase cells by in situ suppression hybridization using recombinant DNA libraries

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Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats

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Advanced transfection with Lipofectamine 2000 reagent: primary neurons, siRNA, and high-throughput applications

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Identification of a family of human centromere proteins using autoimmune sera from patients with scleroderma

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Genomic and genetic definition of a functional human centromere

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12 December 2020

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Centromere protein B null mice are mitotically and meiotically normal but have lower body and testis weights

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Centromere-encoded RNAs are integral components of the maize kinetochore.

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Retention of Latent Centromeres in the Mammalian Genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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piRNAs--the ancient hunters of genome invaders

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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MicroRNA maturation: stepwise processing and subcellular localization

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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CENP-B controls centromere formation depending on the chromatin context

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Transcripts from both strands of a satellite DNA occur on lampbrush chromosome loops of the newt Notophthalmus

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Telomeric trans-silencing: an epigenetic repression combining RNA silencing and heterochromatin formation

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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A new mathematical model for relative quantification in real-time RT-PCR

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Small RNAs correspond to centromere heterochromatic repeats

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Transcription of two human genes from a bidirectional endogenous retrovirus promoter

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12 December 2020

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inferred from PubMed ID database lookup

Transcription and evolutionary dynamics of the centromeric satellite repeat CentO in rice.

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

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Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Loss of Dicer fowls up centromeres

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PubMed

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12 December 2020

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Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The centromeric retrotransposons of rice are transcribed and differentially processed by RNA interference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conserved organization of centromeric chromatin in flies and humans

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cytogenetic and molecular evaluation of centromere-associated DNA sequences from a marsupial (Macropodidae: Macropus rufogriseus) X chromosome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

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A distinct small RNA pathway silences selfish genetic elements in the germline

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Developmentally regulated piRNA clusters implicate MILI in transposon control

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

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RNA maps reveal new RNA classes and a possible function for pervasive transcription

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the piRNA Complex from Rat Testes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accumulation of small murine minor satellite transcripts leads to impaired centromeric architecture and function

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

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High-resolution organization of mouse centromeric and pericentromeric DNA

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12 December 2020

based on heuristic

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RNA interference is required for normal centromere function in fission yeast

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and functional characterization of noncoding repetitive RNAs transcribed in stressed human cells

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequencing of a rice centromere uncovers active genes

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coexamination of site-specific transcription factor binding and promoter activity in living cells

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18839199

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12 December 2020

based on heuristic

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CENP-B box is required for de novo centromere chromatin assembly on human alphoid DNA.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dicer is essential for formation of the heterochromatin structure in vertebrate cells

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNAi-mediated targeting of heterochromatin by the RITS complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional elements residing within satellite DNAs

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of Dicer-deficient murine embryonic stem cells.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18839199

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1007/S00412-008-0181-5

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18839199

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18839199%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 January 2020

PubMed publication ID

18839199

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18839199

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18839199%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 January 2020

 

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