Context dependent RNA-RNA recognition in a three-dimensional model of the 16S rRNA core (Q73509276)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9222495%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

title

Context dependent RNA-RNA recognition in a three-dimensional model of the 16S rRNA core (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9222495%20AND%20SRC:MED&resulttype=core&format=json

nucleic acid tertiary structure

4 November 2019

main subject

1 reference

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6 November 2024

molecular model

1 reference

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6 November 2024

B. Masquida

1 reference

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6 November 2024

B. Felden

series ordinal

1 reference

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6 November 2024

E. Westhof

series ordinal

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6 November 2024

language of work or name

English

0 references

publication date

1 June 1997

1 reference

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4 November 2019

June 1997

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=9222495

full work available at URL

6 November 2024

https://api.elsevier.com/content/article/PII:S0968089697000539?httpAccept=text/xml

1 reference

DOI

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

https://api.elsevier.com/content/article/PII:S0968089697000539?httpAccept=text/plain

6 November 2024

1 reference

DOI

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

Bioorganic & Medicinal Chemistry

6 November 2024

published in

1 reference

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4 November 2019

volume

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4 November 2019

issue

1 reference

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4 November 2019

page(s)

1021-1035

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9222495%20AND%20SRC:MED&resulttype=core&format=json

Assembly mapping of 30S ribosomal proteins from E. coli

4 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Dynamics of in vitro assembly of 16 S rRNA into 30 S ribosomal subunits.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Model for the three-dimensional folding of 16 S ribosomal RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

RNA tectonics: towards RNA design

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

A complete mapping of the proteins in the small ribosomal subunit of Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Positions of S2, S13, S16, S17, S19 and S21 in the 30 S ribosomal subunit of Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

A quantitative model of the Escherichia coli 16 S RNA in the 30 S ribosomal subunit.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Probing the assembly of the 3' major domain of 16 S rRNA. Interactions involving ribosomal proteins S2, S3, S10, S13 and S14.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Probing the assembly of the 3' major domain of 16 S ribosomal RNA. Quaternary interactions involving ribosomal proteins S7, S9 and S19

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Interaction of proteins S16, S17 and S20 with 16 S ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Interaction of ribosomal proteins S5, S6, S11, S12, S18 and S21 with 16 S rRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The Structure of Ribosomal RNA: A Three-Dimensional Jigsaw Puzzle

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Investigation of the tertiary folding of Escherichia coli ribosomal RNA by intra-RNA cross-linking in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Mapping of chloroplast mutations conferring resistance to antibiotics in Chlamydomonas: evidence for a novel site of streptomycin resistance in the small subunit rRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

A novel site for streptomycin resistance in the "530 loop" of chloroplast 16S ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Effects of Membrane-Energy Mutations and Cations on Streptomycin and Gentamicin Accumulation by Bacteria: a Model for Entry of Streptomycin and Gentamicin in Susceptible and Resistant Bacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The 530 loop of 16S rRNA: a signal to EF-Tu?

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

DNA-hybridization electron microscopy. Localization of five regions of 16 S rRNA on the surface of 30 S ribosomal subunits

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Investigation of the tertiary folding of Escherichia coli 16S RNA by in situ intra-RNA cross-linking within 30S ribosomal subunits.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Solution Structure of Prokaryotic Ribosomal Protein S17 by High-Resolution NMR Spectroscopy†

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The Ribosomal Database Project (RDP).

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Three-dimensional structure of a hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Unique structure of new serine tRNAs responsible for decoding leucine codon CUG in various Candida species and their putative ancestral tRNA genes

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Structural changes in the 530 loop of Escherichia coli 16S rRNA in mutants with impaired translational fidelity

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Solution structure of [d(ATGAGCGAATA)]2. Adjacent G:A mismatches stabilized by cross-strand base-stacking and BII phosphate groups

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Crystal structure of a group I ribozyme domain: principles of RNA packing

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

RNA tertiary structure mediation by adenosine platforms

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Site-directed hydroxyl radical probing of the rRNA neighborhood of ribosomal protein S5.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The conserved 900 stem/loop region in Escherichia coli 16S ribosomal RNA is not required for protein synthesis.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

RNA-protein cross-linking in Escherichia coli 30S ribosomal subunits; determination of sites on 16S RNA that are cross-linked to proteins S3, S4, S5, S7, S8, S9, S11, S13, S19 and S21 by treatment with methyl p-azidophenyl acetimidate

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Immunoelectron microscopic localization of ribosomal proteins BS8, BS9, BS20, BL3 and BL21 on the surface of 30S and 50S subunits from Bacillus stearothermophilus.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The 70S Escherichia coli ribosome at 23 A resolution: fitting the ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosome

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Three-dimensional reconstruction of the Escherichia coli 30 S ribosomal subunit in ice.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The Escherichia coli ribosomal RNA leader nut region interacts specifically with mature 16S RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

A graphics model building and refinement system for macromolecules

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Crystallographic refinement of yeast aspartic acid transfer RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

DRAWNA: a program for drawing schematic views of nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Selective perturbation of G530 of 16 S rRNA by translational miscoding agents and a streptomycin-dependence mutation in protein S12.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

RNA-protein cross-linking in Escherichia coli 30S ribosomal subunits; determination of sites on 16S RNA that are cross-linked to proteins S3, S4, S7, S9, S10, S11, S17, S18 and S21 by treatment with bis-(2-chloroethyl)-methylamine

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

DNA-hybridization electron microscopy tertiary structure of 16 S rRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

The localization of multiple sites on 16S RNA which are cross-linked to proteins S7 and S8 in Escherichia coli 30S ribosomal subunits by treatment with 2-iminothiolane

1 reference

https://api.crossref.org/works/10.1016%2FS0968-0896%2897%2900053-9

7 January 2021

Crystallographic evidence for the existence of CH...O, CH...N and CH...Cl hydrogen bonds

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1021/JA00383A012

Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids

5 March 2023

1 reference

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

Formation of the central pseudoknot in 16S rRNA is essential for initiation of translation

6 November 2024

1 reference

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

A functional pseudoknot in 16S ribosomal RNA

6 November 2024

1 reference

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

Identification of a 16-S RNA Fragment Crosslinked to Protein S1 within Escherichia coli Ribosomal 30-S Subunits by the Use of a Crosslinking Reagent: Ethyl 4-Azidobenzoylaminoacetimidate

6 November 2024

1 reference

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

Molecular modelling with the PS 300: a new generation graphics display system

6 November 2024

1 reference

https://api.crossref.org/works/10.1016/S0968-0896(97)00053-9

6 November 2024

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9222495%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9222495%20AND%20SRC:MED&resulttype=core&format=json