Identification of Potential Lead Molecules for Zika Envelope Protein from In Silico Perspective (Q62485463)

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scholarly article published in Avicenna journal of medical biotechnology

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English	Identification of Potential Lead Molecules for Zika Envelope Protein from In Silico Perspective	scholarly article published in Avicenna journal of medical biotechnology

Statements

instance of

scholarly article

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title

Identification of Potential Lead Molecules for Zika Envelope Protein from In Silico Perspective (English)

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main subject

Flavivirus

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Zika virus

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based on heuristic

inferred from title

in silico

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based on heuristic

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author name string

Selvaa Kumar Chellasamy

series ordinal

1

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Shine Devarajan

series ordinal

2

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language of work or name

English

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number of pages

10

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inferred from page(s)

published in

Avicenna Journal of Medical Biotechnology

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volume

11

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issue

1

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page(s)

94-103

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cites work

Thermal stability and protein structure

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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Gene mapping and positive identification of the non-structural proteins NS2A, NS2B, NS3, NS4B and NS5 of the flavivirus Kunjin and their cleavage sites

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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A simple method for displaying the hydropathic character of a protein

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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inferred from PubMed ID database lookup

Thermostability and aliphatic index of globular proteins.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Structural requirements for low-pH-induced rearrangements in the envelope glycoprotein of tick-borne encephalitis virus

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Proteolytic activation of tick-borne encephalitis virus by furin

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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The molecular basis of virulence of the encephalitogenic flaviviruses

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping of functional elements in the stem-anchor region of tick-borne encephalitis virus envelope protein E

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Substitutions at the putative receptor-binding site of an encephalitic flavivirus alter virulence and host cell tropism and reveal a role for glycosaminoglycans in entry

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Structure validation by Calpha geometry: phi,psi and Cbeta deviation

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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The importance of being outer: consequences of the distinction between the outer and inner surfaces of flavivirus glycoprotein E.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A ligand-binding pocket in the dengue virus envelope glycoprotein

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Zika virus. I. Isolations and serological specificity

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Zika virus. II. Pathogenicity and physical properties

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Structure of the dengue virus envelope protein after membrane fusion

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of a flavivirus envelope glycoprotein in its low-pH-induced membrane fusion conformation

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational changes of the flavivirus E glycoprotein

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Variable surface epitopes in the crystal structure of dengue virus type 3 envelope glycoprotein

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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inferred from PubMed ID database lookup

Construction and Mutagenesis of an Artificial Bicistronic Tick-Borne Encephalitis Virus Genome Reveals an Essential Function of the Second Transmembrane Region of Protein E in Flavivirus Assembly

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Combinatorial Computational Approaches to Identify Tetracycline Derivatives as Flavivirus Inhibitors

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Checklist of Iranian mosquitoes (Diptera: Culicidae).

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Design, synthesis, and biological evaluation of antiviral agents targeting flavivirus envelope proteins

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Antiviral compounds discovered by virtual screening of small-molecule libraries against dengue virus E protein

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

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A small-molecule dengue virus entry inhibitor

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: a historical perspective.

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In silico screening of small molecule libraries using the dengue virus envelope E protein has identified compounds with antiviral activity against multiple flaviviruses.

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A small molecule fusion inhibitor of dengue virus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and functionality in flavivirus NS-proteins: perspectives for drug design

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Class II ADP-ribosylation factors are required for efficient secretion of dengue viruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cryo-EM structure of the mature dengue virus at 3.5-Å resolution

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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based on heuristic

inferred from PubMed ID database lookup

Complete Coding Sequence of Zika Virus from a French Polynesia Outbreak in 2013

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stated in

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reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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based on heuristic

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UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zika virus genome from the Americas

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Possible Association Between Zika Virus Infection and Microcephaly — Brazil, 2015

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stated in

PubMed

reference URL

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Interim Guidelines for Prevention of Sexual Transmission of Zika Virus — United States, 2016

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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Zika Virus: Medical Countermeasure Development Challenges

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

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The Emergence of Zika Virus as a Global Health Security Threat: A Review and a Consensus Statement of the INDUSEM Joint working Group (JWG)

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

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ZIKA-How fast does this virus mutate?

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The 3.8 Å resolution cryo-EM structure of Zika virus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structures of the Zika Virus Envelope Protein and Its Complex with a Flavivirus Broadly Protective Antibody

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural Basis of Zika Virus-Specific Antibody Protection

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Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus

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stated in

PubMed

reference URL

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retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zika Virus Infection and Associated Neurologic Disorders in Brazil

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recurrent Potent Human Neutralizing Antibodies to Zika Virus in Brazil and Mexico

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30800249

retrieved

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based on heuristic

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Identifiers

PMC publication ID

6359704

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PubMed publication ID

30800249

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