SAVER: gene expression recovery for single-cell RNA sequencing. (Q64940282)

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2 April 2020

title

SAVER: gene expression recovery for single-cell RNA sequencing (English)

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2 April 2020

1 reference

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2 April 2020

Mo Huang

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2 April 2020

Jingshu Wang

1 reference

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2 April 2020

Eduardo Torre

1 reference

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2 April 2020

Hannah Dueck

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2 April 2020

Roberto Bonasio

1 reference

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2 April 2020

John I Murray

1 reference

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2 April 2020

Arjun Raj

1 reference

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2 April 2020

Mingyao Li

1 reference

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2 April 2020

Nancy R Zhang

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2 April 2020

publication date

25 June 2018

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2 April 2020

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2 April 2020

volume

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2 April 2020

issue

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2 April 2020

page(s)

539-542

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Power analysis of single-cell RNA-sequencing experiments

2 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Bayesian approach to single-cell differential expression analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

An accurate and robust imputation method scImpute for single-cell RNA-seq data.

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Single-cell gene expression analysis reveals genetic associations masked in whole-tissue experiments

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Stochastic mRNA synthesis in mammalian cells

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH.

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

GiniClust: detecting rare cell types from single-cell gene expression data with Gini index

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Single-Cell RNA-Seq Reveals Hypothalamic Cell Diversity

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

A statistical approach for identifying differential distributions in single-cell RNA-seq experiments

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Spatial reconstruction of single-cell gene expression data

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex.

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

BASiCS: Bayesian Analysis of Single-Cell Sequencing Data

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

SCnorm: robust normalization of single-cell RNA-seq data

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Regularization Paths for Generalized Linear Models via Coordinate Descent

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms.

1 reference

https://api.crossref.org/works/10.1038%2FS41592-018-0033-Z

7 January 2021

A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29941873

12 December 2020

inferred from PubMed ID database lookup

Gene expression distribution deconvolution in single-cell RNA sequencing.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29941873

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/S41592-018-0033-Z

1 reference

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Dimensions Publication ID

2 April 2020

0 references

1 reference

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2 April 2020

PubMed publication ID

29941873

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29941873%20AND%20SRC:MED&resulttype=core&format=json