One fold, two functions: cytochrome P460 and cytochrome '-β from the methanotroph (Bath) (Q64274203)

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scientific article published on 21 January 2019

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English	One fold, two functions: cytochrome P460 and cytochrome '-β from the methanotroph (Bath)	scientific article published on 21 January 2019

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One fold, two functions: cytochrome P460 and cytochrome c'-β from the methanotroph Methylococcus capsulatus (Bath) (English)

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Hannah R Adams

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Dimitri A Svistunenko

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Jordi Paps

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Colin R Andrew

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Michael Hough

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12

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Callie Krewson

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2

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Jenny E Vardanega

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Sotaro Fujii

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Tadeo Moreno-Chicano

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5

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Tadeo Moreno

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Chicano

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Yoshihiro Sambongi

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8

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English

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publication date

21 January 2019

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published in

Chemical Science

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10

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10

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3031-3041

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Creative Commons Attribution 3.0 Unported

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21 January 2019

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cites work

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Primary structure of cytochrome c' of Methylococcus capsulatus Bath: evidence of a phylogenetic link between P460 and c'-type cytochromes

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MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

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The Crystal Structure of Cytochrome P460 of Nitrosomonas europaea Reveals a Novel Cytochrome Fold and Heme−Protein Cross-link † , ‡

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Metabolic aspects of aerobic obligate methanotrophy

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Transcription of nitrification genes by the methane-oxidizing bacterium, Methylococcus capsulatus strain Bath.

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Crystallization and preliminary X-ray crystallographic analysis of a new crystal form of hydroxylamine oxidoreductase from Nitrosomonas europaea

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Features and development of Coot

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Surveying N2O-Producing Pathways in Bacteria

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REFMAC5 for the refinement of macromolecular crystal structures

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Carbon monoxide poisoning is prevented by the energy costs of conformational changes in gas-binding haemproteins

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based on heuristic

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A distal pocket Leu residue inhibits the binding of O2 and NO at the distal heme site of cytochrome c'

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Mechanism of binding of NO to soluble guanylyl cyclase: implication for the second NO binding to the heme proximal site

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Methane, microbes and models: fundamental understanding of the soil methane cycle for future predictions.

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How good are my data and what is the resolution?

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https://pubmed.ncbi.nlm.nih.gov/30996884

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inferred from PubMed ID database lookup

Structural studies of hydroxylamine oxidoreductase reveal a unique heme cofactor and a previously unidentified interaction partner

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https://pubmed.ncbi.nlm.nih.gov/30996884

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based on heuristic

inferred from PubMed ID database lookup

The influence of heme ruffling on spin densities in ferricytochromes c probed by heme core 13C NMR.

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based on heuristic

inferred from PubMed ID database lookup

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

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based on heuristic

inferred from PubMed ID database lookup

Accurate secondary structure prediction and fold recognition for circular dichroism spectroscopy

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based on heuristic

inferred from PubMed ID database lookup

Cytochromes c': Structure, Reactivity and Relevance to Haem-Based Gas Sensing.

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of Heme Ruffling Changes in MhuD Using UV-vis Spectroscopy

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrosomonas europaea cytochrome P460 is a direct link between nitrification and nitrous oxide emission

1 reference

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PubMed

reference URL

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and functional insights into thermally stable cytochrome c' from a thermophile

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Engineering proximal vs. distal heme-NO coordination via dinitrosyl dynamics: implications for NO sensor design.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30996884

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitric oxide is an obligate bacterial nitrification intermediate produced by hydroxylamine oxidoreductase

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30996884

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Eponymous Cofactors in Cytochrome P460s from Ammonia-Oxidizing Bacteria Are Iron Porphyrinoids Whose Macrocycles Are Dibasic.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30996884

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stabilization of mesophilic Allochromatium vinosum cytochrome c' through specific mutations modeled by a thermophilic homologue.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30996884

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Influences of the heme-lysine crosslink in cytochrome P460 over redox catalysis and nitric oxide sensitivity.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30996884

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BeStSel: a web server for accurate protein secondary structure prediction and fold recognition from the circular dichroism spectra.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30996884

retrieved

12 December 2020

based on heuristic

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Identifiers

DOI

10.1039/C8SC05210G

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Europe PubMed Central

PMC publication ID

6427953

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30996884%20AND%20SRC:MED&resulttype=core&format=json

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4 May 2020

PMC publication ID

6427953

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Europe PubMed Central

PMC publication ID

6427953

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30996884%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

PubMed publication ID

30996884

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Europe PubMed Central

PMC publication ID

6427953

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30996884%20AND%20SRC:MED&resulttype=core&format=json

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4 May 2020

 

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