CENP-B box and pJalpha sequence distribution in human alpha satellite higher-order repeats (HOR). (Q51928487)

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scientific article published on 22 November 2006

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English	CENP-B box and pJalpha sequence distribution in human alpha satellite higher-order repeats (HOR).	scientific article published on 22 November 2006

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PubMed publication ID

17115329

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22 December 2019

title

CENP-B box and pJalpha sequence distribution in human alpha satellite higher-order repeats (HOR) (English)

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PubMed publication ID

17115329

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22 December 2019

author

Nenad Pavin

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5

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PubMed publication ID

17115329

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22 December 2019

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Marija Rosandić

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1

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PubMed publication ID

17115329

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22 December 2019

Vladimir Paar

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2

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PubMed publication ID

17115329

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22 December 2019

Ivan Basar

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3

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PubMed publication ID

17115329

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22 December 2019

Matko Gluncić

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4

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PubMed publication ID

17115329

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22 December 2019

Ivan Pilas

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6

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PubMed publication ID

17115329

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22 December 2019

publication date

22 November 2006

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PubMed publication ID

17115329

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22 December 2019

published in

Chromosome Research

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PubMed publication ID

17115329

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22 December 2019

volume

14

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PubMed publication ID

17115329

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22 December 2019

issue

7

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PubMed publication ID

17115329

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22 December 2019

page(s)

735-753

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17115329

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22 December 2019

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Extensive sequence polymorphisms associated with chromosome 10 alpha satellite DNA and its close linkage to markers from the pericentromeric region

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Long-range analyses of the centromeric regions of human chromosomes 13, 14 and 21: identification of a narrow domain containing two key centromeric DNA elements

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Physical map of the centromeric region of human chromosome 7: relationship between two distinct alpha satellite arrays

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The role of CENP-B and alpha-satellite DNA: de novo assembly and epigenetic maintenance of human centromeres

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12 December 2020

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Evidence for a fast, intrachromosomal conversion mechanism from mapping of nucleotide variants within a homogeneous alpha-satellite DNA array

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12 December 2020

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Structural organization of multiple alphoid subsets coexisting on human chromosomes 1, 4, 5, 7, 9, 15, 18, and 19.

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12 December 2020

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Cloning and comparative mapping of a human chromosome 4-specific alpha satellite DNA sequence

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12 December 2020

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Presence and abundance of CENP-B box sequences in great ape subsets of primate-specific alpha-satellite DNA.

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12 December 2020

based on heuristic

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Sequence, higher order repeat structure, and long-range organization of alpha satellite DNA specific to human chromosome 8.

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12 December 2020

based on heuristic

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Organization and evolution of alpha satellite DNA from human chromosome 11.

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12 December 2020

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Chromosome-specific alpha satellite DNA: nucleotide sequence analysis of the 2.0 kilobasepair repeat from the human X chromosome

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12 December 2020

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Comparative mapping of human alphoid sequences in great apes using fluorescence in situ hybridization

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12 December 2020

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Long-range organization of tandem arrays of alpha satellite DNA at the centromeres of human chromosomes: high-frequency array-length polymorphism and meiotic stability.

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12 December 2020

based on heuristic

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Genomic Organization of Human Centromeric Alpha Satellite DNA: Characterization of a Chromosome 17 Alpha Satellite Sequence

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

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Identification of a family of human centromere proteins using autoimmune sera from patients with scleroderma

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

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Genomic and genetic definition of a functional human centromere

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pulsed-field gel analysis of alpha-satellite DNA at the human X chromosome centromere: high-frequency polymorphisms and array size estimate

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

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Chromosomal dynamics of human neocentromere formation

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PubMed

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a cloned repetitive DNA sequence concentrated on the human X chromosome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the centromeric regions of the human genome assembly

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a subdomain of CENP-B that is necessary and sufficient for localization to the human centromere

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome-specific subsets of human alpha satellite DNA: analysis of sequence divergence within and between chromosomal subsets and evidence for an ancestral pentameric repeat

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Key-string algorithm--novel approach to computational analysis of repetitive sequences in human centromeric DNA.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Construction of YAC-based mammalian artificial chromosomes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular organization and haplotype analysis of centromeric DNA from human chromosome 17: implications for linkage in neurofibromatosis

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mammalian chromosome structure

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PubMed

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequence heterogeneity of alpha satellite repetitive DNA: a survey of alphoid sequences from different human chromosomes

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PubMed

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12 December 2020

based on heuristic

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Genetic and physical analyses of the centromeric and pericentromeric regions of human chromosome 5: recombination across 5cen

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PubMed

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Centromere protein B assembles human centromeric alpha-satellite DNA at the 17-bp sequence, CENP-B box

1 reference

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https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic organization, sequence and polymorphism of the human chromosome 4-specific alpha-satellite DNA.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome-specific organization of human alpha satellite DNA.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of alpha satellite

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Site-specific base deletions in human alpha-satellite monomer DNAs are associated with regularly distributed CENP-B boxes

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome-specific subfamilies within human alphoid repetitive DNA.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the human centromere at metaphase.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of alphoid DNA sequences specific for the pericentric regions of chromosomes 4, 5, 9, and 19.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distribution of CENP-B boxes reflected in CREST centromere antigenic sites on long-range alpha-satellite DNA arrays of human chromosome 21.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human centromeric DNAs.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detection of restriction fragment length polymorphisms at the centromeres of human chromosomes by using chromosome-specific alpha satellite DNA probes: implications for development of centromere-based genetic linkage maps

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning of human centromeres by transformation-associated recombination in yeast and generation of functional human artificial chromosomes.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CpG methylation of the CENP-B box reduces human CENP-B binding

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome-specific alpha satellite DNA: isolation and mapping of a polymorphic alphoid repeat from human chromosome 10

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of DNA near long tandem arrays of alpha satellite DNA at the centromere of human chromosome 7.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Alpha satellite DNAs on chromosomes 10 and 12 are both members of the dimeric suprachromosomal subfamily, but display little identity at the nucleotide sequence level

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel nuclear protein binds centromeric alpha satellite DNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A helix-turn-helix structure unit in human centromere protein B (CENP-B).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular cloning of cDNA for CENP-B, the major human centromere autoantigen

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid creation of BAC-based human artificial chromosome vectors by transposition with synthetic alpha-satellite arrays

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vitro assembly of the CENP-B/alpha-satellite DNA/core histone complex: CENP-B causes nucleosome positioning

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Near the edge of a chromosome's "black hole"

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome-specific alpha satellites: Two distinct families on human chromosome 18

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A survey of the genomic distribution of alpha satellite DNA on all the human chromosomes, and derivation of a new consensus sequence

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for selection in evolution of alpha satellite DNA: the central role of CENP-B/pJ alpha binding region

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ColorHOR--novel graphical algorithm for fast scan of alpha satellite higher-order repeats and HOR annotation for GenBank sequence of human genome

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CENP-B box is required for de novo centromere chromatin assembly on human alphoid DNA.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Centromeres and kinetochores: from epigenetics to mitotic checkpoint signaling

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interspersed repeats are found predominantly in the "old" alpha satellite families

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Homology between human and simian repeated DNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural analysis of alpha-satellite DNA and centromere proteins using extended chromatin and chromosomes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17115329

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1007/S10577-006-1078-X

1 reference

stated in

Europe PubMed Central

PubMed publication ID

17115329

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17115329%20AND%20SRC:MED&resulttype=core&format=json

retrieved

22 December 2019

PubMed publication ID

17115329

1 reference

stated in

Europe PubMed Central

PubMed publication ID

17115329

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17115329%20AND%20SRC:MED&resulttype=core&format=json

retrieved

22 December 2019

ResearchGate publication ID

6683238

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