Gene promoter and exon DNA methylation changes in colon cancer development - mRNA expression and tumor mutation alterations. (Q55443533)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29945573%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

title

Gene promoter and exon DNA methylation changes in colon cancer development - mRNA expression and tumor mutation alterations (English)

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2 April 2020

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2 April 2020

Béla Molnár

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2 April 2020

Orsolya Galamb

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2 April 2020

Bálint Péterfia

1 reference

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2 April 2020

Barnabás Wichmann

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2 April 2020

István Csabai

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2 April 2020

András Bodor

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2 April 2020

Alexandra Kalmár

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2 April 2020

Krisztina Andrea Szigeti

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2 April 2020

Barbara Kinga Barták

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2 April 2020

Zsófia Brigitta Nagy

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2 April 2020

Gábor Valcz

1 reference

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2 April 2020

Árpád V Patai

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2 April 2020

Zsolt Tulassay

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2 April 2020

language of work or name

English

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publication date

27 June 2018

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2 April 2020

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2 April 2020

volume

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2 April 2020

issue

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2 April 2020

page(s)

695

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Creative Commons Attribution 4.0 International

2 April 2020

start time

27 June 2018

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April 2022 Public Data File from Crossref

copyrighted

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15 July 2018

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H2.0-like homeobox 1 acts as a tumor suppressor in hepatocellular carcinoma

15 July 2018

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Identification of Sestrin3 Involved in the In vitro Resistance of Colorectal Cancer Cells to Irinotecan

15 July 2018

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An ShRNA Based Genetic Screen Identified Sesn2 as a Potential Tumor Suppressor in Lung Cancer via Suppression of Akt-mTOR-p70S6K Signaling

15 July 2018

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Regional Bias of Intratumoral Genetic Heterogeneity of Apoptosis-Related Genes BAX, APAF1, and FLASH in Colon Cancers with High Microsatellite Instability

15 July 2018

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15 July 2018

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15 July 2018

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15 July 2018

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15 July 2018

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15 July 2018

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DNA methylation changes in genes frequently mutated in sporadic colorectal cancer and in the DNA repair and Wnt/β-catenin signaling pathway genes

15 July 2018

1 reference

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Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer

15 July 2018

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DDB2 suppresses tumorigenicity by limiting the cancer stem cell population in ovarian cancer

15 July 2018

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Gene promoter methylation in colorectal cancer and healthy adjacent mucosa specimens: correlation with physiological and pathological characteristics, and with biomarkers of one-carbon metabolism

15 July 2018

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A panel of genes methylated with high frequency in colorectal cancer

15 July 2018

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Identification of novel hypermethylated genes and demethylating effect of vincristine in colorectal cancer

15 July 2018

1 reference

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DNA methylation as an epigenetic biomarker in colorectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Toward a comprehensive and systematic methylome signature in colorectal cancers

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Identification of novel DNA-methylated genes that correlate with human prostate cancer and high-grade prostatic intraepithelial neoplasia.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Genome-wide identification and validation of a novel methylation biomarker, SDC2, for blood-based detection of colorectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

DDB2 suppresses epithelial-to-mesenchymal transition in colon cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Dysplasia-carcinoma transition specific transcripts in colonic biopsy samples

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Whole-genome methylation analysis of benign and malignant colorectal tumours

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Comprehensive molecular characterization of human colon and rectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Functions of DNA methylation: islands, start sites, gene bodies and beyond

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Fast gapped-read alignment with Bowtie 2

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Identification of differential gene expressions in colorectal cancer and polyp by cDNA microarray.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Up-regulation of GTSE1 lacks a relationship with clinical data in lung cancer.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Epigenetics and colorectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Classification of Epstein-Barr virus-positive gastric cancers by definition of DNA methylation epigenotypes

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Analysis of molecular aberrations of Wnt pathway gladiators in colorectal cancer in the Kashmiri population

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

A genome-wide DNA methylation study in colorectal carcinoma

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Genome-scale analysis of aberrant DNA methylation in colorectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

LINE-1 hypomethylation during primary colon cancer progression

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Identification and validation of highly frequent CpG island hypermethylation in colorectal adenomas and carcinomas

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

ZIC1 is downregulated through promoter hypermethylation, and functions as a tumor suppressor gene in colorectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Identification of an intermediate signature that marks the initial phases of the colorectal adenoma-carcinoma transition

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Promoter methylation status of hMLH1, MGMT, and CDKN2A/p16 in colorectal adenomas

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Aberrant gene promoter methylation associated with sporadic multiple colorectal cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

p21 expression in colon cancer and modifying effects of patient age and body mass index on prognosis

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

A cohort study of tumoral LINE-1 hypomethylation and prognosis in colon cancer

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Local IGFBP-3 mRNA expression, apoptosis and risk of colorectal adenomas

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

DNA methylation biomarkers for blood-based colorectal cancer screening

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Cancer as an epigenetic disease: DNA methylation and chromatin alterations in human tumours

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Aberrant CpG-island methylation has non-random and tumour-type-specific patterns.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Mechanisms for the involvement of DNA methylation in colon carcinogenesis

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

DNA methylation and mutation

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

5-Methylcytosine in eukaryotic DNA.

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Genetic alterations during colorectal-tumor development

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Colorectal adenoma and cancer detection based on altered methylation pattern of SFRP1, SFRP2, SDC2, and PRIMA1 in plasma samples

15 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

DNA methylation is a key factor in understanding differentiation phenotype in esophageal squamous cell carcinoma.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Analysis of DNA methylation in bowel lavage fluid for detection of colorectal cancer

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

SOX1 functions as a tumor suppressor by antagonizing the WNT/β-catenin signaling pathway in hepatocellular carcinoma

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Methylation of TFPI2 gene is frequently detected in advanced well-differentiated colorectal cancer.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Transcriptome profile of human colorectal adenomas.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

A susceptibility gene set for early onset colorectal cancer that integrates diverse signaling pathways: implication for tumorigenesis

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Relationship between point gene mutation, chromosomal abnormality, and tumour suppressor gene methylation status in colorectal adenomas.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Crypt-restricted loss and decreased protein expression of cytochrome C oxidase subunit I as potential hypothesis-driven biomarkers of colon cancer risk

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

Expression and localization of homeodomain proteins DLX4, HB9 and HB24 in malignant and benign human colorectal tissues

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

A ‘metastasis-prone’ signature for early-stage mismatch-repair proficient sporadic colorectal cancer patients and its implications for possible therapeutics

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6020382

MUC12 mRNA expression is an independent marker of prognosis in stage II and stage III colorectal cancer

30 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29945573

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA methylation status of a distinctively different subset of genes is associated with each histologic Lauren classification subtype in early gastric carcinogenesis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29945573

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12885-018-4609-X

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29945573%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

2 April 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s12885-018-4609-x

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29945573%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

PubMed publication ID

29945573

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29945573%20AND%20SRC:MED&resulttype=core&format=json