Orchestration of thiamin biosynthesis and central metabolism by combined action of the thiamin pyrophosphate riboswitch and the circadian clock in Arabidopsis (Q43422131)

From Wikidata

Jump to navigation Jump to search

scientific article published on 22 January 2013

Language	Label	Description	Also known as
English	Orchestration of thiamin biosynthesis and central metabolism by combined action of the thiamin pyrophosphate riboswitch and the circadian clock in Arabidopsis	scientific article published on 22 January 2013

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Orchestration of thiamin biosynthesis and central metabolism by combined action of the thiamin pyrophosphate riboswitch and the circadian clock in Arabidopsis (English)

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

circadian rhythm

0 references

Adriano Nunes Nesi

4

object named as

Adriano Nunes-Nesi

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Alisdair R Fernie

7

object named as

Alisdair R Fernie

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Wagner L Araújo

3

object named as

Wagner L Araújo

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

8

object named as

Asaph Aharoni

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

author name string

Samuel E Bocobza

1

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Sergey Malitsky

2

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Sagit Meir

5

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Michal Shapira

6

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

22 January 2013

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

25

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

288-307

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

Procedures for numerical analysis of circadian rhythms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Starch turnover: pathways, regulation and role in growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Circadian integration of metabolism and energetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Circadian control of carbohydrate availability for growth in Arabidopsis plants at night

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Mild reductions in mitochondrial NAD-dependent isocitrate dehydrogenase activity result in altered nitrate assimilation and pigmentation but do not impact growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Metabolic control exerted by the 2-oxoglutarate dehydrogenase reaction: a cross-kingdom comparison of the crossroad between energy production and nitrogen assimilation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in cold stress response.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Inhibition of 2-oxoglutarate dehydrogenase in potato tuber suggests the enzyme is limiting for respiration and confirms its importance in nitrogen assimilation,.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

The transcript and metabolite networks affected by the two clades of Arabidopsis glucosinolate biosynthesis regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Switching the light on plant riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Gene expression and metabolism in tomato fruit surface tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thylakoid membrane remodeling during state transitions in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

AtTHIC, a gene involved in thiamine biosynthesis in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thiamine biosynthesis in algae is regulated by riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Riboswitch-dependent gene regulation and its evolution in the plant kingdom

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Reduced expression of succinyl-coenzyme A ligase can be compensated for by up-regulation of the gamma-aminobutyrate shunt in illuminated tomato leaves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Control of alternative RNA splicing and gene expression by eukaryotic riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Structure, mechanism and catalytic duality of thiamine-dependent enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Photoperiodic control of flowering: not only by coincidence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thiamin Phosphorylation by Thiamin Pyrophosphotransferase during Seed Germination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Daylength and circadian effects on starch degradation and maltose metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

In vivo respiratory metabolism of illuminated leaves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

A Robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: comparison of changes of enzyme activities and transcript levels during diurnal cycles and in prolonged darkness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Kinetics of labelling of organic and amino acids in potato tubers by gas chromatography-mass spectrometry following incubation in (13)C labelled isotopes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Respiratory metabolism: glycolysis, the TCA cycle and mitochondrial electron transport

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Adenine riboswitches and gene activation by disruption of a transcription terminator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

A new chromatographic method for the determination of thiamine and its mono-, di-and triphosphates in animal tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Regulation of pyruvate dehydrogenase complex activity in plant cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Biochemical and physiological studies of Arabidopsis thaliana transgenic lines with repressed expression of the mitochondrial pyruvate dehydrogenase kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Sensing Small Molecules by Nascent RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Physiological Signals That Induce Flowering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Carbon assimilation and metabolism in potato leaves deficient in plastidial phosphoglucomutase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Molecular mechanisms of thiamine utilization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Fructose 2,6-bisphosphate activates pyrophosphate: fructose-6-phosphate 1-phosphotransferase and increases triose phosphate to hexose phosphate cycling in heterotrophic cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Sucrose synthase activity does not restrict glycolysis in roots of transgenic potato plants under hypoxic conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thiamin biosynthesis in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Aspartate 155 of human transketolase is essential for thiamine diphosphate–magnesium binding, and cofactor binding is required for dimer formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

At GRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

A transketolase assembly defect in a Wernicke-Korsakoff syndrome patient

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thi1, a thiamine biosynthetic gene in Arabidopsis thaliana, complements bacterial defects in DNA repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Evidence for the thiamine biosynthetic pathway in higher-plant plastids and its developmental regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Regulation of the pyruvate dehydrogenase complexes in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Rapid insertional mutagenesis of DNA by polymerase chain reaction (PCR).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Ubiquitin extension proteins of Arabidopsis thaliana. Structure, localization, and expression of their promoters in transgenic tobacco.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Thiamine in Schizosaccharomyces pombe: dephosphorylation, intracellular pool, biosynthesis and transport.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

High control coefficient of transketolase in the nonoxidative pentose phosphate pathway of human erythrocytes: NMR, antibody, and computer simulation studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

27 August 2018

Gas chromatography mass spectrometry–based metabolite profiling in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584542

1 December 2018

The transition to flowering

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of the genetic, molecular, and biochemical basis of the Arabidopsis thaliana thiamin auxotroph th1

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutants of Arabidopsis with altered regulation of starch degradation

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A th-1 Mutant of Arabidopsis thaliana Is Defective for a Thiamin-Phosphate-Synthesizing Enzyme: Thiamin Phosphate Pyrophosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Technical advance: application of high-performance liquid chromatography with photodiode array detection to the metabolic profiling of plant isoprenoids

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutation of Arabidopsis plastid phosphoglucose isomerase affects leaf starch synthesis and floral initiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photometric method for routine determination of kcat and carbamylation of rubisco

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thiamin pyrophosphokinase is required for thiamin cofactor activation in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/23341335

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1105/TPC.112.106385

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

23 November 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q43422131&oldid=1988464209"