An ultraviolet crosslink in the hammerhead ribozyme dependent on 2-thiocytidine or 4-thiouridine substitution (Q42848786)

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scientific article published on November 1, 1997

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Language	Label	Description	Also known as
English	An ultraviolet crosslink in the hammerhead ribozyme dependent on 2-thiocytidine or 4-thiouridine substitution	scientific article published on November 1, 1997

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

title

An ultraviolet crosslink in the hammerhead ribozyme dependent on 2-thiocytidine or 4-thiouridine substitution (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

main subject

ribozyme

0 references

author name string

L. Wang

series ordinal

1

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9336468

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9336468

retrieved

20 November 2024

D. E. Ruffner

series ordinal

2

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9336468

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9336468

retrieved

20 November 2024

language of work or name

English

0 references

publication date

1 November 1997

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

full work available at URL

https://academic.oup.com/nar/article-pdf/25/21/4355/6965745/25-21-4355.pdf

file format

Portable Document Format

online access status

open access

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9336468

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9336468

retrieved

20 November 2024

https://europepmc.org/articles/PMC147037

file format

HTML

online access status

open access

content deliverer

Europe PubMed Central

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9336468

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9336468

retrieved

20 November 2024

https://europepmc.org/articles/PMC147037?pdf=render

file format

Portable Document Format

online access status

open access

content deliverer

Europe PubMed Central

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9336468

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9336468

retrieved

20 November 2024

http://academic.oup.com/nar/article-pdf/25/21/4355/6965745/25-21-4355.pdf

file format

Portable Document Format

1 reference

stated in

Crossref

DOI

10.1093/NAR/25.21.4355

reference URL

https://api.crossref.org/works/10.1093/NAR/25.21.4355

retrieved

20 November 2024

published in

Nucleic Acids Research

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

volume

25

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

issue

21

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

page(s)

4355-4361

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

cites work

Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Kinetic characterization of two I/II format hammerhead ribozymes

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

retrieved

27 May 2018

Structure and function of the hammerhead ribozyme: an unfinished story

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Folding of DNA substrate-hairpin ribozyme domains: use of deoxy 4-thiouridine as an intrinsic photolabel

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PubMed Central

reference URL

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27 May 2018

Three-dimensional structure of a hammerhead ribozyme

1 reference

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PubMed Central

reference URL

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27 May 2018

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Enhancement of the cleavage rates of DNA-armed hammerhead ribozymes by various divalent metal ions

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PubMed Central

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27 May 2018

Probing RNA tertiary structure: interhelical crosslinking of the hammerhead ribozyme

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

The roles of the conserved pyrimidine bases in hammerhead ribozyme catalysis: evidence for a magnesium ion-binding site

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PubMed Central

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27 May 2018

Enzymatic replacement of the anticodon of yeast phenylalanine transfer ribonucleic acid

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27 May 2018

Stability constants of magnesium and cadmium complexes of adenine nucleotides and thionucleotides and rate constants for formation and dissociation of magnesium-ATP and magnesium-ADP

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27 May 2018

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

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27 May 2018

Autolytic processing of a phosphorothioate diester bond

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27 May 2018

Stereospecificity of nucleases towards phosphorothioate-substituted RNA: stereochemistry of transcription by T7 RNA polymerase.

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27 May 2018

Thiophosphate interference experiments locate phosphates important for the hammerhead RNA self-cleavage reaction

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Rapid and simple purification of T7 RNA polymerase

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PubMed Central

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27 May 2018

Hammerhead ribozyme-mediated cleavage of the long terminal repeat RNA of human immunodeficiency virus type 1.

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Role of divalent metal ions in the hammerhead RNA cleavage reaction

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Conformation and structural fluctuations of a 218 nucleotides long rRNA fragment: 4-thiouridine as an intrinsic photolabelling probe

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PubMed Central

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27 May 2018

Configurationally defined phosphorothioate-containing oligoribonucleotides in the study of the mechanism of cleavage of hammerhead ribozymes

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PubMed Central

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27 May 2018

Synthesis of modified nucleoside 3',5'-bisphosphates and their incorporation into oligoribonucleotides with T4 RNA ligase

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Sequence requirements of the hammerhead RNA self-cleavage reaction

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147037

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27 May 2018

Chemical structures of the TU-C and TU-C(red) products derived from E. coli tRNA

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the borohydride reduction product of photolinked 4-thiouracil and cytosine. Fluorescent probe of transfer ribonucleic acid tertiary structure

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hammerhead ribozyme: a three dimensional model based on photo-crosslinking data

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photochemistry of 4-thiouridine in Escherichia coli transfer RNA1Val

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies on the hammerhead RNA self-cleaving domain

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple folded conformations of a hammerhead ribozyme domain under cleavage conditions

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A small catalytic oligoribonucleotide

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9336468

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthesis and purification of oligonucleotides containing sulfur substituted nucleobases : 4- thiouracil, 4-thiothymine and 6-mercaptopurine

series ordinal

16

1 reference

stated in

Crossref

DOI

10.1093/NAR/25.21.4355

reference URL

https://api.crossref.org/works/10.1093/NAR/25.21.4355

retrieved

20 November 2024

The photochemistry of thiocarbonyl compounds

series ordinal

27

1 reference

stated in

Crossref

DOI

10.1093/NAR/25.21.4355

reference URL

https://api.crossref.org/works/10.1093/NAR/25.21.4355

retrieved

20 November 2024

Identifiers

DOI

10.1093/NAR/25.21.4355

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

PMC publication ID

147037

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

PubMed publication ID

9336468

1 reference

stated in

Europe PubMed Central

PMC publication ID

147037

retrieved

8 November 2017

ResearchGate publication ID

13890215

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