Molecular renormalization group coarse-graining of polymer chains: application to double-stranded DNA. (Q42538747)

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scientific article published on May 2009

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Language	Label	Description	Also known as
English	Molecular renormalization group coarse-graining of polymer chains: application to double-stranded DNA.	scientific article published on May 2009

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scholarly article

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Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

title

Molecular renormalization group coarse-graining of polymer chains: application to double-stranded DNA. (English)

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stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

author

Garegin A Papoian

series ordinal

2

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stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

author name string

Alexey Savelyev

series ordinal

1

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Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

language of work or name

English

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publication date

1 May 2009

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stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

published in

Biophysical Journal

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stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

volume

96

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stated in

Europe PubMed Central

PMC publication ID

2712212

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1 November 2017

issue

10

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stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

page(s)

4044-4052

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Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

cites work

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28 May 2018

The multiscale coarse-graining method. I. A rigorous bridge between atomistic and coarse-grained models

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28 May 2018

Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers

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28 May 2018

Electrostatic, steric, and hydration interactions favor Na(+) condensation around DNA compared with K(+).

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28 May 2018

Flexible histone tails in a new mesoscopic oligonucleosome model

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DNA and its counterions: a molecular dynamics study

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Coarse-graining in polymer simulation: from the atomistic to the mesoscopic scale and back

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Canonical dynamics: Equilibrium phase-space distributions

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Polyionic charge density plays a key role in differential recognition of mobile ions by biopolymers

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Brownian dynamics of double-stranded DNA in periodic systems with discrete salt

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16 August 2018

A coarse grain model for DNA.

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Multiscale modeling of nucleosome dynamics

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Polymer chain models of DNA and chromatin.

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Multiscale modeling of lipids and lipid bilayers

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Inter-DNA electrostatics from explicit solvent molecular dynamics simulations

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https://pubmed.ncbi.nlm.nih.gov/19450476

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A multiscale coarse-graining method for biomolecular systems

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19450476

retrieved

12 December 2020

based on heuristic

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Calculation of effective interaction potentials from radial distribution functions: A reverse Monte Carlo approach

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19450476

retrieved

12 December 2020

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Identifiers

DOI

10.1016/J.BPJ.2009.02.067

1 reference

stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

PMC publication ID

2712212

1 reference

stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

PubMed publication ID

19450476

1 reference

stated in

Europe PubMed Central

PMC publication ID

2712212

retrieved

1 November 2017

ResearchGate publication ID

24435315

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