Genomic determinants of protein evolution and polymorphism in Arabidopsis. (Q42245496)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21926095%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

Genomic determinants of protein evolution and polymorphism in Arabidopsis (English)

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12 February 2020

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12 February 2020

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12 February 2020

Mikkel Heide Schierup

series ordinal

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12 February 2020

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12 February 2020

Troels T Hansen

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12 February 2020

Kate St Onge

series ordinal

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12 February 2020

publication date

16 September 2011

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Genome Biology and Evolution

12 February 2020

published in

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12 February 2020

volume

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12 February 2020

page(s)

1210-1219

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Creative Commons Attribution-NonCommercial 3.0 Unported

12 February 2020

start time

3 October 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted

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cites work

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26 October 2017

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26 October 2017

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26 October 2017

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Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution.

26 October 2017

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Positive and negative selection on noncoding DNA in Drosophila simulans

26 October 2017

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Selection on amino acid substitutions in Arabidopsis

26 October 2017

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No effect of recombination on the efficacy of natural selection in primates

26 October 2017

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Genomewide spatial correspondence between nonsynonymous divergence and neutral polymorphism reveals extensive adaptation in Drosophila

26 October 2017

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Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome

26 October 2017

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Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

26 October 2017

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Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

26 October 2017

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PAML 4: phylogenetic analysis by maximum likelihood

26 October 2017

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Gene expression and protein length influence codon usage and rates of sequence evolution in Populus tremula

26 October 2017

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Synonymous codon usage in Escherichia coli: selection for translational accuracy.

26 October 2017

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transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences

26 October 2017

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A gene expression map of Arabidopsis thaliana development

26 October 2017

1 reference

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Recombination and base composition: the case of the highly self-fertilizing plant Arabidopsis thaliana

26 October 2017

1 reference

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Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection

26 October 2017

1 reference

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Adaptive protein evolution in Drosophila

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

Contrasting patterns of nonneutral evolution in proteins encoded in nuclear and mitochondrial genomes.

26 October 2017

1 reference

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A codon-based model of nucleotide substitution for protein-coding DNA sequences

26 October 2017

1 reference

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Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

26 October 2017

1 reference

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Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change

26 October 2017

1 reference

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Estimating the genomewide rate of adaptive protein evolution in Drosophila

29 May 2018

1 reference

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Factors that Contribute to Variation in Evolutionary Rate among Arabidopsis Genes

29 May 2018

1 reference

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Positive and negative selection on noncoding DNA close to protein-coding genes in wild house mice.

17 August 2018

1 reference

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Genome-wide evidence for efficient positive and purifying selection in Capsella grandiflora, a plant species with a large effective population size

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

Natural selection on synonymous and nonsynonymous mutations shapes patterns of polymorphism in Populus tremula

17 August 2018

1 reference

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Evolution of protein-coding genes in Drosophila.

17 August 2018

1 reference

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The quest for the universals of protein evolution

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

Adaptive evolution of non-coding DNA in Drosophila

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

Effects of gene expression on molecular evolution in Arabidopsis thaliana and Arabidopsis lyrata.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

The genomic rate of adaptive amino acid substitution in Drosophila.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

The cost of inbreeding in Arabidopsis.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296466

17 August 2018

Identifiers

DOI

10.1093/GBE/EVR094

1 reference

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release_5botyp3npfep7k4wgaq7jjaswy

12 February 2020

Fatcat ID

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Fatcat

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mapped directly with Wikidata item

24 November 2022

based on heuristic

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12 February 2020

PubMed publication ID

21926095

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21926095%20AND%20SRC:MED&resulttype=core&format=json