Chapter 11. Identification and analysis of tRNAs that are degraded in Saccharomyces cerevisiae due to lack of modifications (Q41885154)

13 October 2017

Chapter 11. Identification and analysis of tRNAs that are degraded in Saccharomyces cerevisiae due to lack of modifications (English)

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13 October 2017

Saccharomyces cerevisiae

object named as

Saccharomyces cerevisiae

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inferred from title

author

Elizabeth J. Grayhack

Elizabeth J Grayhack

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Irina Chernyakov

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13 October 2017

Melanie A Baker

series ordinal

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13 October 2017

Eric M Phizicky

series ordinal

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13 October 2017

language of work or name

English

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publication date

1 January 2008

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13 October 2017

Methods in Enzymology

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13 October 2017

449

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13 October 2017

221-237

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A systematic library for comprehensive overexpression screens in Saccharomyces cerevisiae

13 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

The many applications of acid urea polyacrylamide gel electrophoresis to studies of tRNAs and aminoacyl-tRNA synthetases

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Identification of yeast tRNA Um(44) 2'-O-methyltransferase (Trm44) and demonstration of a Trm44 role in sustaining levels of specific tRNA(Ser) species

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Microarray analysis of RNA processing and modification

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

The La protein functions redundantly with tRNA modification enzymes to ensure tRNA structural stability

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Depletion of Saccharomyces cerevisiae tRNA(His) guanylyltransferase Thg1p leads to uncharged tRNAHis with additional m(5)C.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Selective charging of tRNA isoacceptors induced by amino-acid starvation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Detection and discovery of RNA modifications using microarrays

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

The specificities of four yeast dihydrouridine synthases for cytoplasmic tRNAs

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Highly conserved modified nucleosides influence Mg2+-dependent tRNA folding

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Dual function of the tRNA(m(5)U54)methyltransferase in tRNA maturation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Probing structural differences between native and in vitro transcribed Escherichia coli valine transfer RNA: evidence for stable base modification-dependent conformers

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Mode of Action of Thiolutin, an Inhibitor of Macromolecular Synthesis in Saccharomyces cerevisiae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Conformation in solution of yeast tRNA(Asp) transcripts deprived of modified nucleotides.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Direct analysis of aminoacylation levels of tRNAs in vivo. Application to studying recognition of Escherichia coli initiator tRNA mutants by glutaminyl-tRNA synthetase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Preparation of RNA and ribosomes from yeast

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Rapid tRNA decay can result from lack of nonessential modifications.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788775

Structure of an unmodified tRNA molecule

18 August 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902411-7

7 January 2021

Aminoacylation of hypomodified tRNAGlu in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902411-7

7 January 2021

Conformational transitions of an unmodified tRNA: implications for RNA folding

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902411-7

7 January 2021

Chapter 4 Preparation of RNA and Ribosomes from Yeast

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902411-7

7 January 2021

10.1016/S0076-6879(08)02411-7

Identifiers

DOI

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release_dkapzxoi3zauxfc6n3lcolalua

13 October 2017

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Fatcat

https://api.fatcat.wiki/v0/release/dkapzxoi3zauxfc6n3lcolalua

24 November 2022

mapped directly with Wikidata item

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13 October 2017

PubMed publication ID

19215761

1 reference