Structural context effects in the oxidation of 8-oxo-7,8-dihydro-2'-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing (Q41814086)

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scientific article published on 29 August 2012

Language	Label	Description	Also known as
English	Structural context effects in the oxidation of 8-oxo-7,8-dihydro-2'-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing	scientific article published on 29 August 2012

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

Structural context effects in the oxidation of 8-oxo-7,8-dihydro-2'-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing (English)

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

Cynthia J. Burrows

4

object named as

Cynthia J Burrows

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

author name string

Aaron M Fleming

1

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

James G Muller

2

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

Adrienne C Dlouhy

3

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Europe PubMed Central

PMC publication ID

12 October 2017

language of work or name

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publication date

29 August 2012

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Europe PubMed Central

PMC publication ID

12 October 2017

number of pages

12

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based on heuristic

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Journal of the American Chemical Society

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Europe PubMed Central

PMC publication ID

12 October 2017

134

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Europe PubMed Central

PMC publication ID

12 October 2017

36

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

15091-15102

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

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1 reference

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Sequence-dependent variation in the reactivity of 8-Oxo-7,8-dihydro-2'-deoxyguanosine toward oxidation

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Influence of substrate complexity on the diastereoselective formation of spiroiminodihydantoin and guanidinohydantoin from chromate oxidation

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Analysis of 7,8-dihydro-8-oxo-2'-deoxyguanosine in cellular DNA during oxidative stress

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8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells

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Superior removal of hydantoin lesions relative to other oxidized bases by the human DNA glycosylase hNEIL1

1 reference

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DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics

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Epigenetics: a historical overview

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Chemical-biological fingerprinting: probing the properties of DNA lesions formed by peroxynitrite

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Base-excision repair of oxidative DNA damage

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The nucleotide pool is a significant target for oxidative stress

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Mechanisms of formation, genotoxicity, and mutation of guanine oxidation products

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Base-stacking and base-pairing contributions into thermal stability of the DNA double helix

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Nei deficient Escherichia coli are sensitive to chromate and accumulate the oxidized guanine lesion spiroiminodihydantoin

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Urea lesion formation in DNA as a consequence of 7,8-dihydro-8-oxoguanine oxidation and hydrolysis provides a potent source of point mutations

1 reference

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Characterization of 5-hydroxy-8-oxo-7,8-dihydroguanosine in the photosensitized oxidation of 8-oxo-7,8-dihydroguanosine and its rearrangement to spiroiminodihydantoin

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Establishing the background level of base oxidation in human lymphocyte DNA: results of an interlaboratory validation study

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1 reference

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Reactive nitrogen species in the chemical biology of inflammation

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Production of reactive oxygen species by mitochondria: central role of complex III.

1 reference

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Measurement of DNA oxidation in human cells by chromatographic and enzymic methods

1 reference

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Direct oxidation of guanine and 7,8-dihydro-8-oxoguanine in DNA by a high-valent chromium complex: a possible mechanism for chromate genotoxicity

1 reference

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Nitrogen dioxide as an oxidizing agent of 8-oxo-7,8-dihydro-2'-deoxyguanosine but not of 2'-deoxyguanosine

1 reference

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Oxidants, oxidative stress and the biology of ageing

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Peroxynitrite reaction products of 3',5'-di-O-acetyl-8-oxo-7, 8-dihydro-2'-deoxyguanosine

1 reference

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Insertion of dGMP and dAMP during in vitro DNA synthesis opposite an oxidized form of 7,8-dihydro-8-oxoguanine

1 reference

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6 June 2018

Gel electrophoretic detection of 7,8-dihydro-8-oxoguanine and 7, 8-dihydro-8-oxoadenine via oxidation by Ir (IV).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440533

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Modification of DNA duplexes to smooth their thermal stability independently of their base content for DNA sequencing by hybridization

1 reference

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6 June 2018

8-Hydroxydeoxyguanosine formation at the 5' site of 5'-GG-3' sequences in double-stranded DNA by UV radiation with riboflavin.

1 reference

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Crystal structure of a DNA duplex containing 8-hydroxydeoxyguanine-adenine base pairs

1 reference

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6 June 2018

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1 reference

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Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG

1 reference

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6 June 2018

DNA strand cleavage at 8-hydroxyguanine residues by hot piperidine treatment

1 reference

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1 reference

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6 June 2018

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1 reference

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1 reference

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18 August 2018

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1 reference

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18 August 2018

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1 reference

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18 August 2018

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1 reference

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Effect of the Oxidized Guanosine Lesions Spiroiminodihydantoin and Guanidinohydantoin on Proofreading by Escherichia coli DNA Polymerase I (Klenow Fragment) in Different Sequence Contexts

1 reference

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18 August 2018

The hydantoin lesions formed from oxidation of 7,8-dihydro-8-oxoguanine are potent sources of replication errors in vivo

1 reference

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18 August 2018

In vitro nucleotide misinsertion opposite the oxidized guanosine lesions spiroiminodihydantoin and guanidinohydantoin and DNA synthesis past the lesions using Escherichia coli DNA polymerase I (Klenow fragment).

1 reference

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18 August 2018

Regulation of one-electron oxidation rate of guanine by base pairing with cytosine derivatives

1 reference

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18 August 2018

Oxidation of 7,8-dihydro-8-oxoguanine affords lesions that are potent sources of replication errors in vivo

1 reference

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18 August 2018

Formation of spiroiminodihydantoin nucleoside by reaction of 8-oxo-7,8-dihydro-2'-deoxyguanosine with hypochlorous acid or a myeloperoxidase-H(2)O(2)-Cl(-) system

1 reference

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18 August 2018

Influence of intervening mismatches on long-range guanine oxidation in DNA duplexes

1 reference

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18 August 2018

Characterization of hydantoin products from one-electron oxidation of 8-oxo-7,8-dihydroguanosine in a nucleoside model

1 reference

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18 August 2018

Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440533

18 August 2018

Base pairing of 8-oxoguanosine and 8-oxo-2'-deoxyguanosine with 2'-deoxyadenosine, 2'-deoxycytosine, 2'-deoxyguanosine, and thymidine.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440533

18 August 2018

Guanine oxidation: one- and two-electron reactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxidised guanidinohydantoin (Ghox) and spiroiminodihydantoin (Sp) are major products of iron- and copper-mediated 8-oxo-7,8-dihydroguanine and 8-oxo-7,8-dihydro-2'-deoxyguanosine oxidation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of spiroiminodihydantoin as a product of one-electron oxidation of 8-Oxo-7,8-dihydroguanosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Carbon-13 magnetic resonance spectra of 8-substituted purine nucleosides. Characteristic shifts for the syn conformation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamic consequences of an abasic lesion in duplex DNA are strongly dependent on base sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The pH-dependent role of superoxide in riboflavin-catalyzed photooxidation of 8-oxo-7,8-dihydroguanosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxidative Nucleobase Modifications Leading to Strand Scission

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-Oxo-7H-dG(syn).dA(anti) alignment at lesion site

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reaction of HO* with guanine derivatives in aqueous solution: formation of two different redox-active OH-adduct radicals and their unimolecular transformation reactions. Properties of G(-H)*

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA Damage Induced in Cells by γ and UVA Radiation As Measured by HPLC/GC−MS and HPLC−EC and Comet Assay

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemistry of Glycosylases and Endonucleases Involved in Base-Excision Repair

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxidative damage to DNA: counterion-assisted addition of water to ionized DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/22880947

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/JA306077B

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 October 2017

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