Genome-wide tracking of unmethylated DNA Alu repeats in normal and cancer cells. (Q40034851)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18084025%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

title

Genome-wide tracking of unmethylated DNA Alu repeats in normal and cancer cells (English)

1 reference

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29 December 2019

1 reference

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29 December 2019

1 reference

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29 December 2019

1 reference

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29 December 2019

María Mar Muñoz Gómez

series ordinal

object named as

Mar Muñoz

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29 December 2019

Laura Vives

1 reference

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29 December 2019

Cristina Morales

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29 December 2019

Elisenda Vendrell

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29 December 2019

language of work or name

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15 December 2007

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29 December 2019

published in

Nucleic Acids Research

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29 December 2019

volume

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29 December 2019

issue

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29 December 2019

page(s)

770-784

1 reference

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Hypomethylation of LINE-1 and Alu in well-differentiated neuroendocrine tumors (pancreatic endocrine tumors and carcinoid tumors).

29 December 2019

cites work

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DNA hypomethylation and human diseases.

22 September 2017

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Alu elements as regulators of gene expression

22 September 2017

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Cancer-linked DNA hypomethylation and its relationship to hypermethylation.

22 September 2017

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22 September 2017

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Genetic disruption of cytosine DNA methyltransferase enzymes induces chromosomal instability in human cancer cells

22 September 2017

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Epigenetic differences arise during the lifetime of monozygotic twins

22 September 2017

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EUKARYOTIC CYTOSINE METHYLTRANSFERASES

22 September 2017

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Loss of acetylation at Lys16 and trimethylation at Lys20 of histone H4 is a common hallmark of human cancer

22 September 2017

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Whole-genome analysis of Alu repeat elements reveals complex evolutionary history

22 September 2017

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Molecular diagnostic applications of DNA methylation technology

22 September 2017

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Transcriptional gene silencing promotes DNA hypermethylation through a sequential change in chromatin modifications in cancer cells.

22 September 2017

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Repetitive sequences that shape the human transcriptome

22 September 2017

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Epigenetics in human disease and prospects for epigenetic therapy

22 September 2017

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Epigenomics: beyond CpG islands.

22 September 2017

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A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements

22 September 2017

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The history of cancer epigenetics

22 September 2017

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The origins and implications of Aluternative splicing

22 September 2017

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Gene silencing in cancer in association with promoter hypermethylation

22 September 2017

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Challenging the dogma: the hidden layer of non‐protein‐coding RNAs in complex organisms

22 September 2017

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Cooperative interactions between epigenetic modifications and their function in the regulation of chromosome architecture

22 September 2017

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The power and the promise of DNA methylation markers

22 September 2017

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Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

22 September 2017

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Origin of a substantial fraction of human regulatory sequences from transposable elements

22 September 2017

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Retroelement distributions in the human genome: variations associated with age and proximity to genes

22 September 2017

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22 September 2017

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Why so many noncoding nucleotides? The eukaryote genome as an epigenetic machine

22 September 2017

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DNA methylation in cancer: too much, but also too little

22 September 2017

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Worms gang up on bacteria

22 September 2017

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Alu repeats and human genomic diversity

22 September 2017

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Methylome profiling of cancer cells by amplification of inter-methylated sites (AIMS).

22 September 2017

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Genes, pseudogenes, and Alu sequence organization across human chromosomes 21 and 22.

22 September 2017

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DNA methylation patterns and epigenetic memory

22 September 2017

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Initial sequencing and analysis of the human genome

22 September 2017

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Inverted Alu repeats unstable in yeast are excluded from the human genome

22 September 2017

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Does SINE evolution preclude Alu function?

22 September 2017

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DNA hypomethylation leads to elevated mutation rates

22 September 2017

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Cytosine methylation and the ecology of intragenomic parasites

22 September 2017

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COBRA: a sensitive and quantitative DNA methylation assay

22 September 2017

1 reference

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Developmental differences in methylation of human Alu repeats

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Alu transcripts: cytoplasmic localisation and regulation by DNA methylation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

The 5-methylcytosine content of highly repeated sequences in human DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Human Alu subfamilies and their methylation revealed by blot hybridization

22 September 2017

1 reference

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Identification of differentially methylated sequences in colorectal cancer by methylated CpG island amplification

22 September 2017

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DNA methylation in the Alu sequences of diploid and haploid primary human cells

25 September 2017

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Large-scale structure of genomic methylation patterns

25 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Fingerprinting of DNA and RNA by arbitrarily primed polymerase chain reaction: applications in cancer research

17 June 2018

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Human genome organization: Alu, LINES, and the molecular structure of metaphase chromosome bands

17 June 2018

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Chromosomal instability correlates with genome-wide DNA demethylation in human primary colorectal cancers.

17 June 2018

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Global DNA demethylation in gastrointestinal cancer is age dependent and precedes genomic damage

20 August 2018

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DNA motifs associated with aberrant CpG island methylation.

20 August 2018

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Promoter hypomethylation of the LINE-1 retrotransposable elements activates sense/antisense transcription and marks the progression of chronic myeloid leukemia

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Interindividual variability and parent of origin DNA methylation differences at specific human Alu elements.

20 August 2018

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A DNA repeat, NBL2, is hypermethylated in some cancers but hypomethylated in others.

20 August 2018

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Differential DNA hypermethylation and hypomethylation signatures in colorectal cancer

20 August 2018

1 reference

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Alu element mutation spectra: molecular clocks and the effect of DNA methylation

20 August 2018

1 reference

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Clusters of regulatory signals for RNA polymerase II transcription associated with Alu family repeats and CpG islands in human promoters

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Alu repeat analysis in the complete human genome: trends and variations with respect to genomic composition

20 August 2018

1 reference

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Nonrandom distribution of alu elements in genes of various functional categories: insight from analysis of human chromosomes 21 and 22.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Enrichment for Histone H3 Lysine 9 Methylation at Alu Repeats in Human Cells

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Biased distribution of inverted and direct Alus in the human genome: implications for insertion, exclusion, and genome stability.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241897

Genomic and transcriptomic prognostic factors in R0 Dukes B and C colorectal cancer patients

20 August 2018

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Localization of a putative tumor suppressor gene in the sub-telomeric region of chromosome 8p

2 December 2018

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12 December 2020

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12 December 2020

Evolutionary evidence suggests that CpG island-associated Alus are frequently unmethylated in human germline

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12 December 2020

High density deletion mapping of bladder cancer localizes the putative tumor suppressor gene between loci D8S504 and D8S264 at chromosome 8p23.3.

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12 December 2020

Cytogenetic and fluorescence in situ hybridization characterization of chromosome 8 rearrangements in head and neck squamous cell carcinomas

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12 December 2020

Chromosomal Instability and Tumors Promoted by DNA Hypomethylation

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12 December 2020

Epigenetics and cancer

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12 December 2020

Frequent loss of heterozygosity for loci on chromosome 8p in hepatocellular carcinoma, colorectal cancer, and lung cancer

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12 December 2020

Identification of the gene-richest bands in human chromosomes

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12 December 2020

Chromosomal translocations are common in natural killer-cell lymphoma/leukemia as shown by spectral karyotyping

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12 December 2020

The fundamental role of epigenetic events in cancer

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKM1105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18084025%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18084025%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

PubMed publication ID

18084025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18084025%20AND%20SRC:MED&resulttype=core&format=json