Chromatin-remodeling for transcription (Q49890634)

23 February 2018

review article

1 reference

title

Chromatin-remodeling for transcription (English)

1 reference

23 February 2018

Roger D Kornberg

1 reference

23 February 2018

Yahli Lorch

1 reference

23 February 2018

publication date

1 January 2017

1 reference

23 February 2018

Quarterly Reviews of Biophysics

published in

1 reference

23 February 2018

volume

1 reference

23 February 2018

page(s)

1 reference

23 February 2018

Transcription elongation factors repress transcription initiation from cryptic sites.

cites work

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Genome-scale identification of nucleosome positions in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

REB1, a yeast DNA-binding protein with many targets, is essential for growth and bears some resemblance to the oncogene myb.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The yeast chromatin remodeler Rsc1-RSC complex is required for transcriptional activation of autophagy-related genes and inhibition of the TORC1 pathway in response to nitrogen starvation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Positioned and G/C-capped poly(dA:dT) tracts associate with the centers of nucleosome-free regions in yeast promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

RSC2, encoding a component of the RSC nucleosome remodeling complex, is essential for 2 microm plasmid maintenance in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Histone chaperone spt16 promotes redeposition of the original h3-h4 histones evicted by elongating RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A functional evolutionary approach to identify determinants of nucleosome positioning: a unifying model for establishing the genome-wide pattern.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The yeast RSC chromatin-remodeling complex is required for kinetochore function in chromosome segregation

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Mechanisms that specify promoter nucleosome location and identity

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Nucleosome loss activates yeast downstream promoters in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Transcription of histone-covered T7 DNA by Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Functional organization of the yeast proteome by systematic analysis of protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Histone octamer transfer by a chromatin-remodeling complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Role of DNA sequence in chromatin remodeling and the formation of nucleosome-free regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Mechanism of chromatin remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Selective removal of promoter nucleosomes by the RSC chromatin-remodeling complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Chromatin remodeling by DNA bending, not twisting

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Activated RSC-nucleosome complex and persistently altered form of the nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

RSC functions as an early double-strand-break sensor in the cell's response to DNA damage

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Rapid spontaneous accessibility of nucleosomal DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Conformational flexibility in the chromatin remodeler RSC observed by electron microscopy and the orthogonal tilt reconstruction method

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The yeast SNF2/SWI2 protein has DNA-stimulated ATPase activity required for transcriptional activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Chromatin Remodelers: From Function to Dysfunction

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Mechanism of histone survival during transcription by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

RNA polymerase complexes cooperate to relieve the nucleosomal barrier and evict histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Nucleosome Stability Distinguishes Two Different Promoter Types at All Protein-Coding Genes in Yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Amino acid substitutions in the structured domains of histones H3 and H4 partially relieve the requirement of the yeast SWI/SNF complex for transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A negative regulator of HO transcription, SIN1 (SPT2), is a nonspecific DNA-binding protein related to HMG1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Genomic Nucleosome Organization Reconstituted with Pure Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The yeast PHO5 promoter: from single locus to systems biology of a paradigm for gene regulation through chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The ins and outs of ATP-dependent chromatin remodeling in budding yeast: biophysical and proteomic perspectives.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A mutation in NPS1/STH1, an essential gene encoding a component of a novel chromatin-remodeling complex RSC, alters the chromatin structure of Saccharomyces cerevisiae centromeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Structure and function of SWI/SNF chromatin remodeling complexes and mechanistic implications for transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The nuclear actin-related proteins Arp7 and Arp9: a dimeric module that cooperates with architectural proteins for chromatin remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The RSC complex localizes to coding sequences to regulate Pol II and histone occupancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The biology of chromatin remodeling complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The two different isoforms of the RSC chromatin remodeling complex play distinct roles in DNA damage responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The yeast chromatin remodeler RSC complex facilitates end joining repair of DNA double-strand breaks

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Structure of a RSC-nucleosome complex and insights into chromatin remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

RSC mobilizes nucleosomes to improve accessibility of repair machinery to the damaged chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

RSC, an essential, abundant chromatin-remodeling complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Sequence periodicities in chicken nucleosome core DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A multisubunit complex containing the SWI1/ADR6, SWI2/SNF2, SWI3, SNF5, and SNF6 gene products isolated from yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Chromatin remodeling through directional DNA translocation from an internal nucleosomal site

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A yeast ARS-binding protein activates transcription synergistically in combination with other weak activating factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Subnucleosomal structures and nucleosome asymmetry across a genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Asymmetric nucleosomes flank promoters in the budding yeast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Five SWI/SNF gene products are components of a large multisubunit complex required for transcriptional enhancement

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

RSC regulates nucleosome positioning at Pol II genes and density at Pol III genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A role for chromatin remodellers in replication of damaged DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Genome-wide location and regulated recruitment of the RSC nucleosome-remodeling complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The genome-wide localization of Rsc9, a component of the RSC chromatin-remodeling complex, changes in response to stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A bacteriophage RNA polymerase transcribes in vitro through a nucleosome core without displacing it.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Evidence that Spt6p controls chromatin structure by a direct interaction with histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Nucleosomes unfold completely at a transcriptionally active promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

FACT facilitates transcription-dependent nucleosome alteration

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

The ctf13-30/CTF13 genomic haploinsufficiency modifier screen identifies the yeast chromatin remodeling complex RSC, which is required for the establishment of sister chromatid cohesion

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Structural analysis of the RSC chromatin-remodeling complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

A Rsc3/Rsc30 zinc cluster dimer reveals novel roles for the chromatin remodeler RSC in gene expression and cell cycle control

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

RSC unravels the nucleosome

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

Nucleosome reconstitution on plasmid-inserted poly(dA) . poly(dT)

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

Abundance of the RSC nucleosome-remodeling complex is important for the cells to tolerate DNA damage in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

A histone octamer can step around a transcribing polymerase without leaving the template

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

The RSC chromatin remodeling complex bears an essential fungal-specific protein module with broad functional roles

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

A nucleosome core is transferred out of the path of a transcribing polymerase

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

The presence of nucleosomes on a DNA template prevents initiation by RNA polymerase II in vitro

1 reference

https://api.crossref.org/works/10.1017%2FS003358351700004X

7 January 2021

The Saccharomyces cerevisiae NPS1 gene, a novel CDC gene which encodes a 160 kDa nuclear protein involved in G2 phase control

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1017/S003358351700004X

Identifiers

DOI

10.1017/S003358351700004X

1 reference

23 February 2018

1 reference

23 February 2018