Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels (Q48042150)

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scientific article published on 16 December 2012

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English	Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels	scientific article published on 16 December 2012

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23242369

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http://europepmc.org/abstract/MED/23242369

title

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels (English)

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23242369

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7 February 2018

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main subject

genome-wide association study

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Junjie Fu

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23242369

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7 February 2018

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Jie Liu

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Jie Liu

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11

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Hui Li

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23242369

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Zhiyu Peng

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23242369

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Xiaohong Yang

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23242369

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Weidong Wang

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23242369

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Jianhua Wang

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23242369

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Yingjia Han

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23242369

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Yuchao Chai

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23242369

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Tingting Guo

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23242369

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Ning Yang

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23242369

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Marilyn L Warburton

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23242369

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Yanbing Cheng

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Xiaomin Hao

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23242369

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Pan Zhang

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23242369

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Jinyang Zhao

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23242369

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http://europepmc.org/abstract/MED/23242369

Yunjun Liu

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23242369

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http://europepmc.org/abstract/MED/23242369

Guoying Wang

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23242369

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http://europepmc.org/abstract/MED/23242369

Jiansheng Li

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19

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23242369

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7 February 2018

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http://europepmc.org/abstract/MED/23242369

Jianbing Yan

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20

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23242369

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http://europepmc.org/abstract/MED/23242369

language of work or name

English

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publication date

16 December 2012

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23242369

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7 February 2018

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http://europepmc.org/abstract/MED/23242369

published in

Nature Genetics

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23242369

retrieved

7 February 2018

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http://europepmc.org/abstract/MED/23242369

volume

45

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23242369

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7 February 2018

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http://europepmc.org/abstract/MED/23242369

issue

1

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23242369

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7 February 2018

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http://europepmc.org/abstract/MED/23242369

page(s)

43-50

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23242369

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7 February 2018

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http://europepmc.org/abstract/MED/23242369

describes a project that uses

genome-wide association study

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inferred from title

cites work

The interrelationship between the accumulation of lipids, protein and the level of acyl carrier protein during the development of Brassica napus L. pollen.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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Identification of a functional transposon insertion in the maize domestication gene tb1.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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Major and minor QTL and epistasis contribute to fatty acid compositions and oil concentration in high-oil maize

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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Protein and lipid sorting between the endoplasmic reticulum and the Golgi complex

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PubMed

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12 December 2020

based on heuristic

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Glycerol-3-phosphate acyltransferase in plants

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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The significance of responses of the genome to challenge

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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inferred from PubMed ID database lookup

Diacylglycerol acyltransferase: a key mediator of plant triacylglycerol synthesis.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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inferred from PubMed ID database lookup

Metabolic engineering of fatty acid biosynthesis in plants.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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inferred from PubMed ID database lookup

Immunocytological localization of two plant fatty acid desaturases in the endoplasmic reticulum

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An 11-bp insertion in Zea mays fatb reduces the palmitic acid content of fatty acids in maize grain

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide association studies identified three independent polymorphisms associated with α-tocopherol content in maize kernels

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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inferred from PubMed ID database lookup

Molecular cloning of an allene oxide synthase: a cytochrome P450 specialized for the metabolism of fatty acid hydroperoxides

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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inferred from PubMed ID database lookup

A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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Overexpression of acyl carrier protein-1 alters fatty acid composition of leaf tissue in Arabidopsis

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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Maize selection passes the century mark: a unique resource for 21st century genomics

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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Sequence variation and genomic organization of fatty acid desaturase-2 (fad2) and fatty acid desaturase-6 (fad6) cDNAs in maize

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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The maize genome contains a helitron insertion

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12 December 2020

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Genome-wide association studies of 14 agronomic traits in rice landraces.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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Expression of Fungal diacylglycerol acyltransferase2 Genes to Increase Kernel Oil in Maize

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PubMed

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12 December 2020

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Arabidopsis FAD2 gene encodes the enzyme that is essential for polyunsaturated lipid synthesis

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PubMed

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12 December 2020

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Cytoscape 2.8: new features for data integration and network visualization

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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Association mapping: critical considerations shift from genotyping to experimental design

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12 December 2020

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Rare genetic variation at Zea mays crtRB1 increases beta-carotene in maize grain

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12 December 2020

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TASSEL: software for association mapping of complex traits in diverse samples

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retrieved

12 December 2020

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Natural genetic variation in lycopene epsilon cyclase tapped for maize biofortification

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PubMed

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12 December 2020

based on heuristic

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Two transposable element insertions are causative mutations for the major domestication gene teosinte branched 1 in modern maize.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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Physiological and developmental regulation of seed oil production.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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CYP86A1 from Arabidopsis thaliana encodes a cytochrome P450-dependent fatty acid omega-hydroxylase

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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DNA damage-induced activation of ATM and ATM-dependent signaling pathways

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12 December 2020

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inferred from PubMed ID database lookup

A first-generation haplotype map of maize

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastid-localised seed acyl-carrier protein of Brassica napus is encoded by a distinct, nuclear multigene family

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis.

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retrieved

12 December 2020

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Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Substrate recognition and selectivity of plant glycerol-3-phosphate acyltransferases (GPATs) from Cucurbita moscata and Spinacea oleracea

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https://pubmed.ncbi.nlm.nih.gov/23242369

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12 December 2020

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The study of eQTL variations by RNA-seq: from SNPs to phenotypes

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

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Expression of ZmLEC1 and ZmWRI1 increases seed oil production in maize

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis genes involved in acyl lipid metabolism. A 2003 census of the candidates, a study of the distribution of expressed sequence tags in organs, and a web-based database.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Duplicate maize Wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis contains nine long-chain acyl-coenzyme a synthetase genes that participate in fatty acid and glycerolipid metabolism

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mixed linear model approach adapted for genome-wide association studies

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression in yeast and tobacco of plant cDNAs encoding acyl CoA:diacylglycerol acyltransferase

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epoxide hydrolases: their roles and interactions with lipid metabolism

1 reference

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reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The genetic architecture of maize flowering time.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Precision mapping of quantitative trait loci

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A distinct type of glycerol-3-phosphate acyltransferase with sn-2 preference and phosphatase activity producing 2-monoacylglycerol

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning and characterization of an acyl-CoA-dependent diacylglycerol acyltransferase 1 (DGAT1) gene from Tropaeolum majus, and a study of the functional motifs of the DGAT protein using site-directed mutagenesis to modify enzyme activity and oil con

1 reference

stated in

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

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The characterization of a mitochondrial acyl carrier protein isoform isolated from Arabidopsis thaliana

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retrieved

12 December 2020

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A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The genetic architecture of response to long-term artificial selection for oil concentration in the maize kernel

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Properties of a membrane-bound triglyceride lipase of rapeseed (Brassica napus L.) cotyledons

1 reference

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PubMed

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retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide association study of leaf architecture in the maize nested association mapping population

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pathways of straight and branched chain fatty acid catabolism in higher plants

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12 December 2020

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Conditions under which genome-wide association studies will be positively misleading.

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PubMed

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retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Whole genome scan detects an allelic variant of fad2 associated with increased oleic acid levels in maize.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A phenylalanine in DGAT is a key determinant of oil content and composition in maize

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Software engineering the mixed model for genome-wide association studies on large samples

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Can the fatty acid selectivity of plant lipases be predicted from the composition of the seed triglyceride?

1 reference

stated in

PubMed

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https://pubmed.ncbi.nlm.nih.gov/23242369

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two long-chain acyl-CoA synthetases from Arabidopsis thaliana involved in peroxisomal fatty acid beta-oxidation

1 reference

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PubMed

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retrieved

12 December 2020

based on heuristic

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Signaling and subcellular targeting by membrane-binding domains

1 reference

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retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Acyl-lipid metabolism

1 reference

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Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNG.2484

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Mapping QTLs for kernel oil content in a tropical maize population

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNG.2484

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Lipolytic isoenzymes from Euphorbia latex

1 reference

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Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNG.2484

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

High-throughput SNP genotyping with the GoldenGate assay in maize

1 reference

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Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNG.2484

retrieved

7 January 2021

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Identifiers

DOI

10.1038/NG.2484

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stated in

Europe PubMed Central

PubMed publication ID

23242369

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/23242369

PubMed publication ID

23242369

1 reference

stated in

Europe PubMed Central

PubMed publication ID

23242369

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/23242369

ResearchGate publication ID

233930811

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