The CATH Dictionary of Homologous Superfamilies (DHS): a consensus approach for identifying distant structural homologues (Q47621170)

4 February 2018

title

The CATH Dictionary of Homologous Superfamilies (DHS): a consensus approach for identifying distant structural homologues (English)

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4 February 2018

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4 February 2018

Frances M. G. Pearl

series ordinal

object named as

Pearl FM

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4 February 2018

Orengo CA

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4 February 2018

Bray JE

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4 February 2018

Todd AE

series ordinal

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4 February 2018

publication date

1 March 2000

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Protein Engineering Design and Selection

published in

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4 February 2018

volume

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issue

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4 February 2018

page(s)

153-165

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4 February 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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Protein folds and families: sequence and structure alignments

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SCOP: a Structural Classification of Proteins database.

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Structure, evolution and action of vitamin B6-dependent enzymes

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GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequences

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

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JOY: protein sequence-structure representation and analysis.

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Structural classification of proteins: new superfamilies

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How far divergent evolution goes in proteins

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A general method applicable to the search for similarities in the amino acid sequence of two proteins

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CORA--topological fingerprints for protein structural families

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Fast structure alignment for protein databank searching

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Protein superfamilies and domain superfolds

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CATH--a hierarchic classification of protein domain structures

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The CATH Database provides insights into protein structure/function relationships.

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Intermediate sequences increase the detection of homology between sequences

21 January 2018

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Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

21 January 2018

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Assigning genomic sequences to CATH

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SMART: identification and annotation of domains from signalling and extracellular protein sequences

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Twilight zone of protein sequence alignments

21 January 2018

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Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

21 January 2018

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Genome analysis: Assigning protein coding regions to three-dimensional structures

21 January 2018

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Combining sensitive database searches with multiple intermediates to detect distant homologues

21 January 2018

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Correlation of observed fold frequency with the occurrence of local structural motifs

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A database of globular protein structural domains: clustering of representative family members into similar folds

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CAMPASS: a database of structurally aligned protein superfamilies

21 January 2018

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21 January 2018

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Protein structure alignment

21 January 2018

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DOMPLOT: a program to generate schematic diagrams of the structural domain organization within proteins, annotated by ligand contacts.

21 January 2018

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Evolution of protein function, from a structural perspective

21 January 2018

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LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions

21 January 2018

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An atlas of protein topology cartoons available on the World-Wide Web.

21 January 2018

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Comparison of solvent-inaccessible cores of homologous proteins: definitions useful for protein modelling

21 January 2018

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A protein structure comparison methodology

21 January 2018

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Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation 1 1Edited by F. E. Cohen

21 January 2018

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Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction

21 January 2018

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21 January 2018

Identifiers

DOI

10.1093/PROTEIN/13.3.153

1 reference

4 February 2018

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4 February 2018