False discovery rate estimation for cross-linked peptides identified by mass spectrometry (Q47408453)

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scientific article published on 8 July 2012

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English	False discovery rate estimation for cross-linked peptides identified by mass spectrometry	scientific article published on 8 July 2012

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scholarly article

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Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

title

False discovery rate estimation for cross-linked peptides identified by mass spectrometry (English)

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Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

author

Martin Beck

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7

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

Ruedi Aebersold

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8

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Ruedi Aebersold

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

Alexander Leitner

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Alexander Leitner

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3

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Thomas Walzthoeni

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1

1 reference

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

Manfred Claassen

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2

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

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http://europepmc.org/abstract/MED/22772729

Franz Herzog

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4

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

Stefan Bohn

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5

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

Friedrich Förster

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6

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Europe PubMed Central

PubMed publication ID

22772729

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15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

publication date

8 July 2012

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Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

published in

Nature Methods

1 reference

stated in

Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

volume

9

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stated in

Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

issue

9

1 reference

stated in

Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

page(s)

901-903

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Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

describes a project that uses

mass spectrometry

1 reference

based on heuristic

inferred from title

cites work

Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of cross-linked peptides from large sequence databases

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crosslinking combined with mass spectrometry for structural proteomics

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical cross-linking and mass spectrometry for protein structural modeling.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bioinformatics tools for the structural elucidation of multi-subunit protein complexes by mass spectrometric analysis of protein-protein cross-links

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

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12 December 2020

based on heuristic

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A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

UCSF Chimera--a visualization system for exploratory research and analysis

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expanding the chemical cross-linking toolbox by the use of multiple proteases and enrichment by size exclusion chromatography

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the 26S proteasome from Schizosaccharomyces pombe at subnanometer resolution

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Empirical bayes methods and false discovery rates for microarrays

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MODBASE, a database of annotated comparative protein structure models.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22772729

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crosslinking-MS analysis reveals RNA polymerase I domain architecture and basis of rRNA cleavage

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNMETH.2103

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

DOI

10.1038/NMETH.2103

1 reference

stated in

Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

PubMed publication ID

22772729

1 reference

stated in

Europe PubMed Central

PubMed publication ID

22772729

retrieved

15 January 2018

reference URL

http://europepmc.org/abstract/MED/22772729

ResearchGate publication ID

228444627

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