Single-copy genes define a conserved order between rice and wheat for understanding differences caused by duplication, deletion, and transposition of genes (Q47194335)

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scientific article published on 25 July 2006

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English	Single-copy genes define a conserved order between rice and wheat for understanding differences caused by duplication, deletion, and transposition of genes	scientific article published on 25 July 2006

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scholarly article

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Single-copy genes define a conserved order between rice and wheat for understanding differences caused by duplication, deletion, and transposition of genes (English)

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

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author name string

Nagendra K Singh

1

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Vivek Dalal

2

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PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Kamlesh Batra

3

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Binay K Singh

4

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

G Chitra

5

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Archana Singh

6

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PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Irfan A Ghazi

7

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Mahavir Yadav

8

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Awadhesh Pandit

9

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Rekha Dixit

10

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PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Pradeep K Singh

11

1 reference

Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Harvinder Singh

12

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Kirpa R Koundal

13

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11 January 2018

http://europepmc.org/abstract/MED/16865332

Kishor Gaikwad

14

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11 January 2018

http://europepmc.org/abstract/MED/16865332

Trilochan Mohapatra

15

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Tilak R Sharma

16

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PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

publication date

25 July 2006

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

Functional and Integrative Genomics

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

7

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

1

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

17-35

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Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

The frequency distribution of gene family sizes in complete genomes.

1 reference

https://api.crossref.org/works/10.1007%2FS10142-006-0033-4

21 January 2018

Mosaic organization of orthologous sequences in grass genomes

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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A workshop report on wheat genome sequencing: International Genome Research on Wheat Consortium

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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The Ashbya gossypii Genome as a Tool for Mapping the Ancient Saccharomyces cerevisiae Genome

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Pack-MULE transposable elements mediate gene evolution in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Macro- and microcolinearity between the genomic region of wheat chromosome 5B containing the Tsn1 gene and the rice genome.

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Restriction of ectopic recombination by interhomolog interactions during Saccharomyces cerevisiae meiosis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome bin map of expressed sequence tags in homoeologous group 1 of hexaploid wheat and homoeology with rice and Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Transposable element contributions to plant gene and genome evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Complex microcolinearity among wheat, rice, and barley revealed by fine mapping of the genomic region harboring a major QTL for resistance to Fusarium head blight in wheat

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Advances in cereal functional genomics

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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From mapping to sequencing, post-sequencing and beyond

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https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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A 2600-locus chromosome bin map of wheat homoeologous group 2 reveals interstitial gene-rich islands and colinearity with rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Comparative genetics in the grasses

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops-Triticum) group

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Examining rates and patterns of nucleotide substitution in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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The map-based sequence of the rice genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Comparative DNA sequence analysis of wheat and rice genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Analysis of expressed sequence tag loci on wheat chromosome group 4

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Numerous small rearrangements of gene content, order and orientation differentiate grass genomes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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A 2500-locus bin map of wheat homoeologous group 5 provides insights on gene distribution and colinearity with rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Sequence composition, organization, and evolution of the core Triticeae genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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The Genomes of Oryza sativa: a history of duplications

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Deletion mapping of homoeologous group 6-specific wheat expressed sequence tags

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Sequence analysis of the long arm of rice chromosome 11 for rice-wheat synteny

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Comparative sequence analysis of the phytochrome C gene and its upstream region in allohexaploid wheat reveals new data on the evolution of its three constituent genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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The evolutionary fate and consequences of duplicate genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Cereal Genome Evolution: Grasses, line up and form a circle

1 reference

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12 December 2020

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The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

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Selection in the evolution of gene duplications

1 reference

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12 December 2020

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Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

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MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Ab initio gene finding in Drosophila genomic DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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A chromosome bin map of 2148 expressed sequence tag loci of wheat homoeologous group 7.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

based on heuristic

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Evidence that rice and other cereals are ancient aneuploids

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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A cytogenetic ladder-map of the wheat homoeologous group-4 chromosomes

1 reference

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12 December 2020

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Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Homoeologous relationships of rice, wheat and maize chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://pubmed.ncbi.nlm.nih.gov/16865332

12 December 2020

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Identifiers

10.1007/S10142-006-0033-4

1 reference

Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

11 January 2018

http://europepmc.org/abstract/MED/16865332

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