Large-scale comparison of protein sequence alignment algorithms with structure alignments (Q46972510)

27 December 2017

title

Large-scale comparison of protein sequence alignment algorithms with structure alignments (English)

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27 December 2017

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27 December 2017

author name string

Sauder JM

series ordinal

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27 December 2017

Arthur JW

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27 December 2017

language of work or name

English

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publication date

1 July 2000

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27 December 2017

published in

Proteins

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27 December 2017

volume

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27 December 2017

issue

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27 December 2017

page(s)

6-22

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27 December 2017

Knowledge-based prediction of protein structures and the design of novel molecules

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Rapid and sensitive sequence comparison with FASTP and FASTA

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Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

21 January 2018

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Significant improvement in accuracy of multiple protein sequence alignments by iterative refinement as assessed by reference to structural alignments

21 January 2018

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A comprehensive comparison of multiple sequence alignment programs

21 January 2018

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A strategy for the rapid multiple alignment of protein sequences. Confidence levels from tertiary structure comparisons

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Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

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21 January 2018

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Derivation of rules for comparative protein modeling from a database of protein structure alignments

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SCOP: a Structural Classification of Proteins database.

21 January 2018

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21 January 2018

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21 January 2018

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

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Using CLUSTAL for multiple sequence alignments

21 January 2018

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Homology-based fold predictions for Mycoplasma genitalium proteins

21 January 2018

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Protein folds and families: sequence and structure alignments

21 January 2018

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21 January 2018

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Assigning folds to the proteins encoded by the genome of Mycoplasma genitalium

21 January 2018

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Identification of native protein folds amongst a large number of incorrect models. The calculation of low energy conformations from potentials of mean force

21 January 2018

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10.1002/(SICI)1097-0134(20000701)40:1<6::AID-PROT30>3.0.CO;2-7

21 January 2018

Identifiers

DOI

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27 December 2017

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27 December 2017