Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins (Q46876645)

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scientific article published on 28 November 2007

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English	Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins	scientific article published on 28 November 2007

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scholarly article

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Europe PubMed Central

PubMed publication ID

26 December 2017

http://europepmc.org/abstract/MED/18045802

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins (English)

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Europe PubMed Central

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26 December 2017

http://europepmc.org/abstract/MED/18045802

isotopic labeling

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26 December 2017

http://europepmc.org/abstract/MED/18045802

Johannes Graumann

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Johannes Graumann

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Jürgen Cox

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26 December 2017

http://europepmc.org/abstract/MED/18045802

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Matthias Mann

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26 December 2017

http://europepmc.org/abstract/MED/18045802

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Nina C Hubner

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26 December 2017

http://europepmc.org/abstract/MED/18045802

Jeong Beom Kim

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26 December 2017

http://europepmc.org/abstract/MED/18045802

Kinarm Ko

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26 December 2017

http://europepmc.org/abstract/MED/18045802

Markus Moser

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26 December 2017

http://europepmc.org/abstract/MED/18045802

Chanchal Kumar

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26 December 2017

http://europepmc.org/abstract/MED/18045802

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28 November 2007

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26 December 2017

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Molecular & Cellular Proteomics

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26 December 2017

http://europepmc.org/abstract/MED/18045802

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26 December 2017

http://europepmc.org/abstract/MED/18045802

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26 December 2017

http://europepmc.org/abstract/MED/18045802

672-683

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26 December 2017

http://europepmc.org/abstract/MED/18045802

Embryonic stem cells: prospects for developmental biology and cell therapy

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The maturing of the human embryonic stem cell transcriptome profile.

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More than 40,000 transcripts, including novel and noncoding transcripts, in mouse embryonic stem cells

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

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Mass spectrometry-based proteomics

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Is proteomics the new genomics?

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Concise review: trends in stem cell proteomics

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Large-scale identification of proteins expressed in mouse embryonic stem cells.

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A quest for human and mouse embryonic stem cell-specific proteins.

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Mass spectrometry-based proteomics turns quantitative

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Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

1 reference

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Functional and quantitative proteomics using SILAC

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Trypsin cleaves exclusively C-terminal to arginine and lysine residues

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The International Protein Index: an integrated database for proteomics experiments

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Qscore: an algorithm for evaluating SEQUEST database search results

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Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

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Probability-based protein identification by searching sequence databases using mass spectrometry data

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On the proper use of mass accuracy in proteomics.

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Genesis: cluster analysis of microarray data

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BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

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The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins

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Gene function in early mouse embryonic stem cell differentiation

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BMP induction of Id proteins suppresses differentiation and sustains embryonic stem cell self-renewal in collaboration with STAT3

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Added value for tandem mass spectrometry shotgun proteomics data validation through isoelectric focusing of peptides

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21 January 2018

Efficient fractionation and improved protein identification by peptide OFFGEL electrophoresis

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Developmental-specific activity of the FGF-4 enhancer requires the synergistic action of Sox2 and Oct-3

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Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells

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The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells

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Sall4 modulates embryonic stem cell pluripotency and early embryonic development by the transcriptional regulation of Pou5f1

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Dppa2 and Dppa4 are closely linked SAP motif genes restricted to pluripotent cells and the germ line

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A stem cell molecular signature

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"Stemness": transcriptional profiling of embryonic and adult stem cells

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New cell lines from mouse epiblast share defining features with human embryonic stem cells

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Identifiers

10.1074/MCP.M700460-MCP200

1 reference

Europe PubMed Central

PubMed publication ID

26 December 2017

http://europepmc.org/abstract/MED/18045802

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 December 2017

http://europepmc.org/abstract/MED/18045802

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