RNAi-induced off-target effects in Drosophila melanogaster: frequencies and solutions (Q46232397)

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scientific article published on May 19, 2011

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English	RNAi-induced off-target effects in Drosophila melanogaster: frequencies and solutions	scientific article published on May 19, 2011

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scholarly article

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Europe PubMed Central

PubMed publication ID

21596801

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20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

title

RNAi-induced off-target effects in Drosophila melanogaster: frequencies and solutions (English)

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Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

main subject

Drosophila melanogaster

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RNA interference

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Europe PubMed Central

PubMed publication ID

21596801

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21596801

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2 December 2024

author

Ody Sibon

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4

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Ody C. M. Sibon

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Europe PubMed Central

PubMed publication ID

21596801

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21596801

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2 December 2024

author name string

Erwin Seinen

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1

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Europe PubMed Central

PubMed publication ID

21596801

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20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

Johannes G. M. Burgerhof

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2

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Europe PubMed Central

PubMed publication ID

21596801

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21596801

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2 December 2024

Ritsert C. Jansen

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3

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Europe PubMed Central

PubMed publication ID

21596801

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21596801

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2 December 2024

language of work or name

English

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National Center for Biotechnology Information

PubMed publication ID

21596801

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=21596801

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2 December 2024

publication date

19 May 2011

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Europe PubMed Central

PubMed publication ID

21596801

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20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

full work available at URL

https://academic.oup.com/bfg/article-pdf/10/4/206/552493/elr017.pdf

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online access status

open access

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Europe PubMed Central

PubMed publication ID

21596801

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21596801

retrieved

2 December 2024

http://academic.oup.com/bfg/article-pdf/10/4/206/552493/elr017.pdf

file format

Portable Document Format

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Crossref

DOI

10.1093/BFGP/ELR017

reference URL

https://api.crossref.org/works/10.1093/BFGP/ELR017

retrieved

2 December 2024

published in

Briefings in functional genomics

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Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

volume

10

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Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

issue

4

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Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

page(s)

206-214

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Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

cites work

Off-target effects associated with long dsRNAs in Drosophila RNAi screens

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21 January 2018

Off-target effects by siRNA can induce toxic phenotype

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21 January 2018

Prevalence of off-target effects in Drosophila RNA interference screens

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21 January 2018

Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity

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21 January 2018

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Cytoplasmic and nuclear retained DMPK mRNAs are targets for RNA interference in myotonic dystrophy cells.

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RNAi-mediated pathways in the nucleus

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Specific and potent RNAi in the nucleus of human cells

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An RNA targeted to the HIV-1 LTR promoter modulates indiscriminate off-target gene activation

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Design and evaluation of genome-wide libraries for RNA interference screens

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21 January 2018

RNAi experiments in D. melanogaster: solutions to the overlooked problem of off-targets shared by independent dsRNAs

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21 January 2018

The electrostatic characteristics of G.U wobble base pairs

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21 January 2018

Tolerated wobble mutations in siRNAs decrease specificity, but can enhance activity in vivo

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Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets

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21 January 2018

Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase

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21 January 2018

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21 January 2018

Comparison of siRNA-induced off-target RNA and protein effects

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21 January 2018

Minimal-length short hairpin RNAs: the relationship of structure and RNAi activity

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Evidence of off-target effects associated with long dsRNAs in Drosophila melanogaster cell-based assays

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1

1 reference

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Crossref

DOI

10.1093/BFGP/ELR017

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https://api.crossref.org/works/10.1093/BFGP/ELR017

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Batch RNAi selector: a standalone program to predict specific siRNA candidates in batches with enhanced sensitivity

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10.1093/BFGP/ELR017

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2 December 2024

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Crossref

DOI

10.1093/BFGP/ELR017

reference URL

https://api.crossref.org/works/10.1093/BFGP/ELR017

retrieved

2 December 2024

Identifiers

DOI

10.1093/BFGP/ELR017

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

PubMed publication ID

21596801

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21596801

retrieved

20 December 2017

reference URL

http://europepmc.org/abstract/MED/21596801

ResearchGate publication ID

51150650

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