Single Nucleotide Polymorphism Microarray Analysis of Genetic Alterations in Cancer (Q45803356)

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scientific article published on January 1, 2011

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English	Single Nucleotide Polymorphism Microarray Analysis of Genetic Alterations in Cancer	scientific article published on January 1, 2011

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Europe PubMed Central

PubMed publication ID

21431646

retrieved

16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

title

Single nucleotide polymorphism microarray analysis of genetic alterations in cancer (English)

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Europe PubMed Central

PubMed publication ID

21431646

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16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

Single Nucleotide Polymorphism Microarray Analysis of Genetic Alterations in Cancer (English)

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Crossref

DOI

10.1007/978-1-61779-074-4_17

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https://api.crossref.org/works/10.1007/978-1-61779-074-4_17

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28 November 2024

main subject

single-nucleotide polymorphism

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author

Charles G. Mullighan

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1

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Europe PubMed Central

PubMed publication ID

21431646

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16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

language of work or name

English

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publication date

1 January 2011

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Europe PubMed Central

PubMed publication ID

21431646

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16 December 2017

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http://europepmc.org/abstract/MED/21431646

2011

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National Center for Biotechnology Information

PubMed publication ID

21431646

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=21431646

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28 November 2024

full work available at URL

https://link.springer.com/content/pdf/10.1007/978-1-61779-074-4_17

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Crossref

DOI

10.1007/978-1-61779-074-4_17

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https://api.crossref.org/works/10.1007/978-1-61779-074-4_17

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28 November 2024

published in

Methods in Molecular Biology

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Europe PubMed Central

PubMed publication ID

21431646

retrieved

16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

volume

730

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stated in

Europe PubMed Central

PubMed publication ID

21431646

retrieved

16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

page(s)

235-258

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Europe PubMed Central

PubMed publication ID

21431646

retrieved

16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

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Single nucleotide polymorphism array analysis of cancer.

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Genome-wide profiling of genetic alterations in acute lymphoblastic leukemia: recent insights and future directions.

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Single nucleotide polymorphism arrays: a decade of biological, computational and technological advances

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Global genomic characterization of acute lymphoblastic leukemia

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A genome-wide scalable SNP genotyping assay using microarray technology

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Integrated detection and population-genetic analysis of SNPs and copy number variation

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Genomic analysis of the clonal origins of relapsed acute lymphoblastic leukemia.

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Rearrangement of CRLF2 in B-progenitor- and Down syndrome-associated acute lymphoblastic leukemia

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28 November 2024

Whole genome DNA copy number changes identified by high density oligonucleotide arrays

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CARAT: a novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays

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dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data

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A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays

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Highly sensitive method for genomewide detection of allelic composition in nonpaired, primary tumor specimens by use of affymetrix single-nucleotide-polymorphism genotyping microarrays

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Allelic dosage analysis with genotyping microarrays.

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ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays

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PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data

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Allele-specific amplification in cancer revealed by SNP array analysis

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Genome-wide analysis of genetic alterations in acute lymphoblastic leukaemia

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BCR–ABL1 lymphoblastic leukaemia is characterized by the deletion of Ikaros

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Deletion of IKZF1 and prognosis in acute lymphoblastic leukemia

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Genomic analysis reveals few genetic alterations in pediatric acute myeloid leukemia

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A set of genes that regulate cell proliferation predicts treatment outcome in childhood acute lymphoblastic leukemia

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Mutations in CBL occur frequently in juvenile myelomonocytic leukemia

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Reference alignment of SNP microarray signals for copy number analysis of tumors

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Estimation and assessment of raw copy numbers at the single locus level

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A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods

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A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6.

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Circular binary segmentation for the analysis of array-based DNA copy number data

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A faster circular binary segmentation algorithm for the analysis of array CGH data

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The human genome browser at UCSC

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28 November 2024

Inferring loss-of-heterozygosity from unpaired tumors using high-density oligonucleotide SNP arrays

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A high-resolution survey of deletion polymorphism in the human genome

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Detection of large-scale variation in the human genome

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Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays

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Extending genome-wide association studies to copy-number variation

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Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma

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Multiple displacement amplification to create a long-lasting source of DNA for genetic studies

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High fidelity of whole-genome amplified DNA on high-density single nucleotide polymorphism arrays

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Impact of whole genome amplification on analysis of copy number variants

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High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays

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10.1007/978-1-61779-074-4_17

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28 November 2024

Identifiers

DOI

10.1007/978-1-61779-074-4_17

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21431646

retrieved

16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

PubMed publication ID

21431646

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21431646

retrieved

16 December 2017

reference URL

http://europepmc.org/abstract/MED/21431646

ResearchGate publication ID

50832969

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