Unintended consequences of plant transformation: a molecular insight. (Q45188219)

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scientific article published in January 2006

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English	Unintended consequences of plant transformation: a molecular insight.	scientific article published in January 2006

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PubMed publication ID

17132892

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22 December 2019

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title

Unintended consequences of plant transformation: a molecular insight (English)

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PubMed publication ID

17132892

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22 December 2019

author

Marcin Filipecki

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1

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PubMed publication ID

17132892

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22 December 2019

Stefan Malepszy

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Stefan Malepszy

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Europe PubMed Central

PubMed publication ID

17132892

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22 December 2019

publication date

1 January 2006

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PubMed publication ID

17132892

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22 December 2019

published in

Journal of Applied Genetics

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PubMed publication ID

17132892

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22 December 2019

volume

47

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17132892

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22 December 2019

issue

4

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17132892

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22 December 2019

page(s)

277-286

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17132892

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22 December 2019

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DNA methylation of embryogenic carrot cell cultures and its variations as caused by mutation, differentiation, hormones and hypomethylating drugs

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The distribution of transgene insertion sites in barley determined by physical and genetic mapping

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Genome-wide insertional mutagenesis of Arabidopsis thaliana

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NMR profiling of transgenic peas

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Antibiotics induce genome-wide hypermethylation in cultured Nicotiana tabacum plants.

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Transcriptional silencing and promoter methylation triggered by double-stranded RNA

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The effect of T-DNA copy number, position and methylation on reporter gene expression in tobacco transformants

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The stability of the Arabidopsis transcriptome in transgenic plants expressing the marker genes nptII and uidA

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Application of two-dimensional gel electrophoresis to interrogate alterations in the proteome of gentically modified crops. 3. Assessing unintended effects

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Transgene expression variability (position effect) of CAT and GUS reporter genes driven by linked divergent T-DNA promoters

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The rb7 matrix attachment region increases the likelihood and magnitude of transgene expression in tobacco cells: a flow cytometric study

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Methylation of ribosomal RNA genes inPetunia hybrida plants, callus cultures and regenerated shoots

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Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

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Stimulation of mitotic recombination events by high levels of RNA polymerase II transcription in yeast

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Sequential occurrence of mutations in a growing rice callus

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Application of two-dimensional gel electrophoresis to interrogate alterations in the proteome of genetically modified crops. 1. Assessing analytical validation

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Metabolite profiling for plant functional genomics

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Transgene-induced gene silencing in plants.

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12 December 2020

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Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems

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The methylation patterns of chromosomal integration regions influence gene activity of transferred DNA in Petunia hybrida

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Genomic stability in Arabidopsis thaliana transgenic plants obtained by floral dip.

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DNA methylation and plant development

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Transgene inheritance in plants

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Matrix attachment regions increase the efficiency and stability of RNA-mediated resistance to tomato spotted wilt virus in transgenic tobacco

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The metabolic profiles of transgenic cucumber lines vary with different chromosomal locations of the transgene

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Fitness costs of induced resistance: emerging experimental support for a slippery concept

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Development of a standard operating procedure (SOP) for the precise quantification of transgene expression levels in rice plants

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A nuclear DNA attachment element mediates elevated and position-independent gene activity

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Transgene behaviour across two generations in a large random population of transgenic rice plants produced by particle bombardment.

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Epigenetic aspects of somaclonal variation in plants

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Genome-wide in silico mapping of scaffold/matrix attachment regions in Arabidopsis suggests correlation of intragenic scaffold/matrix attachment regions with gene expression

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Somatic and Meiotic Chromosomal Recombination between Inverted Duplications in Transgenic Tobacco Plants

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A comprehensive characterization of single-copy T-DNA insertions in the Arabidopsis thaliana genome

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Epigenetic interactions between Arabidopsis transgenes: characterization in light of transgene integration sites

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Costs and benefits of cold tolerance in transgenic Arabidopsis thaliana

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Stable high-level transgene expression inArabidopsis thalianausing gene silencing mutants and matrix attachment regions

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Pathogen stress increases somatic recombination frequency in Arabidopsis

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Genetic instability of plant tissue cultures: breakdown of normal controls

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Chromatin-remodeling and memory factors. New regulators of plant development

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Use of matrix attachment regions (MARs) to minimize transgene silencing.

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Evidence for genomic changes in transgenic rice (Oryza sativa L.) recovered from protoplasts

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Strategies for precise quantification of transgene expression levels over several generations in rice

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Nuclear scaffolds and scaffold-attachment regions in higher plants

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The mutational consequences of plant transformation

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Plant chromosome/marker gene fusion assay for study of normal and truncated T-DNA integration events

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based on heuristic

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Transgeneration memory of stress in plants.

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PubMed

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based on heuristic

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Silencing in Arabidopsis T-DNA transformants: the predominant role of a gene-specific RNA sensing mechanism versus position effects

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17132892

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inferred from PubMed ID database lookup

Tissue culture-induced DNA methylation polymorphisms in repetitive DNA of tomato calli and regenerated plants

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/17132892

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inferred from PubMed ID database lookup

Frequent collinear long transfer of DNA inclusive of the whole binary vector during Agrobacterium-mediated transformation

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Somaclonal variation - a novel source of variability from cell cultures for plant improvement

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The effect of stress on genome regulation and structure

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RIGS (repeat-induced gene silencing) in Arabidopsis is transcriptional and alters chromatin configuration

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The MAR-Mediated Reduction in Position Effect Can Be Uncoupled from Copy Number-Dependent Expression in Transgenic Plants.

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Generation and flanking sequence analysis of a rice T-DNA tagged population

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Neither inverted repeat T-DNA configurations nor arrangements of tandemly repeated transgenes are sufficient to trigger transgene silencing

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https://pubmed.ncbi.nlm.nih.gov/17132892

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VIP1, an Arabidopsis protein that interacts with Agrobacterium VirE2, is involved in VirE2 nuclear import and Agrobacterium infectivity

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

T-DNA insertional mutagenesis in Arabidopsis

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17132892

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Condensation of chromatin in transcriptional regions of an inactivated plant transgene: evidence for an active role of transcription in gene silencing

1 reference

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PubMed

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Comparison of tuber proteomes of potato varieties, landraces, and genetically modified lines

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Assessment of the food safety issues related to genetically modified foods.

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based on heuristic

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Sequence database of 1172 T‐DNA insertion sites in Arabidopsis activation‐tagging lines that showed phenotypes in T1 generation

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17132892

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Application of two-dimensional gel electrophoresis to interrogate alterations in the proteome of genetically modified crops. 2. Assessing natural variability

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17132892

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

T-DNA insertion mutagenesis in Arabidopsis: going back and forth

1 reference

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https://pubmed.ncbi.nlm.nih.gov/17132892

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12 December 2020

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Identifiers

DOI

10.1007/BF03194637

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stated in

Europe PubMed Central

PubMed publication ID

17132892

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17132892%20AND%20SRC:MED&resulttype=core&format=json

retrieved

22 December 2019

Dimensions Publication ID

1040364817

0 references

PubMed publication ID

17132892

1 reference

stated in

Europe PubMed Central

PubMed publication ID

17132892

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17132892%20AND%20SRC:MED&resulttype=core&format=json

retrieved

22 December 2019

 

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