Molecular motions of human HIV-1 gp120 envelope glycoproteins (Q44649287)

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scientific article published on 2 July 2008

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English	Molecular motions of human HIV-1 gp120 envelope glycoproteins	scientific article published on 2 July 2008

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

title

Molecular motions of human HIV-1 gp120 envelope glycoproteins (English)

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stated in

Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

author name string

Shu-Qun Liu

series ordinal

1

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Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

Shi-Xi Liu

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2

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Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

Yun-Xin Fu

series ordinal

3

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Europe PubMed Central

PubMed publication ID

18594881

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5 December 2017

publication date

2 July 2008

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stated in

Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

published in

Journal of Molecular Modeling

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stated in

Europe PubMed Central

PubMed publication ID

18594881

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5 December 2017

volume

14

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Europe PubMed Central

PubMed publication ID

18594881

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5 December 2017

issue

9

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Europe PubMed Central

PubMed publication ID

18594881

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5 December 2017

page(s)

857-870

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Europe PubMed Central

PubMed publication ID

18594881

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5 December 2017

cites work

GROMACS 3.0: a package for molecular simulation and trajectory analysis

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21 January 2018

Structure and flexibility of Streptococcus agalactiae hyaluronate lyase complex with its substrate. Insights into the mechanism of processive degradation of hyaluronan

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

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Protein structure prediction and structural genomics

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The complete Consensus V3 loop peptide of the envelope protein gp120 of HIV-1 shows pronounced helical character in solution

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Challenges in the development of an effective HIV vaccine: current approaches and future directions

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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The Protein Data Bank

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Conformational sampling and dynamics of membrane proteins from 10-nanosecond computer simulations.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamite: a simple way to gain insight into protein motions.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

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Frequent Detection and Isolation of Cytopathic Retroviruses (HTLV-III) from Patients with AIDS and at Risk for AIDS

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PubMed

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12 December 2020

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The CD4 (T4) antigen is an essential component of the receptor for the AIDS retrovirus

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

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CD4-induced interaction of primary HIV-1 gp120 glycoproteins with the chemokine receptor CCR-5.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Essential dynamics of proteins

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Universal Protein Resource (UniProt)

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Human monoclonal antibody 2G12 defines a distinctive neutralization epitope on the gp120 glycoprotein of human immunodeficiency virus type 1

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Energetics of the HIV gp120-CD4 binding reaction

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

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Fluctuation and Cross-correlation Analysis of Protein Motions Observed in Nanosecond Molecular Dynamics Simulations

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Structure of a V3-containing HIV-1 gp120 core

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structures of HIV-1 gp120 envelope glycoproteins from laboratory-adapted and primary isolates

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Collective variable description of native protein dynamics

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The antigenic structure of the HIV gp120 envelope glycoprotein

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CD4-dependent, antibody-sensitive interactions between HIV-1 and its co-receptor CCR-5.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Vaccines and immunology: elucidating immunity to HIV-1 and current prospects for AIDS vaccine development

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

VMD: visual molecular dynamics

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Prediction of protein conformational freedom from distance constraints

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the conformational state and flexibility of HIV-1 glycoprotein gp120 core domain

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of gp41 as the transmembrane protein coded by the HTLV-III/LAV envelope gene.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular motions of human cyclin-dependent kinase 2.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HIV-1 evades antibody-mediated neutralization through conformational masking of receptor-binding sites

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

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Large-amplitude nonlinear motions in proteins

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of a T-Lymphotropic Retrovirus from a Patient at Risk for Acquired Immune Deficiency Syndrome (AIDS)

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quasi-harmonic method for studying very low frequency modes in proteins.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Atomic insight into the CD4 binding-induced conformational changes in HIV-1 gp120.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HIV-1 Entry Cofactor: Functional cDNA Cloning of a Seven-Transmembrane, G Protein-Coupled Receptor

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Collective protein dynamics in relation to function

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CD4 binding partially locks the bridging sheet in gp120 but leaves the beta2/3 strands flexible

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PAS domains. Common structure and common flexibility

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of an unliganded simian immunodeficiency virus gp120 core

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Domain motions in bacteriophage T4 lysozyme: a comparison between molecular dynamics and crystallographic data.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative protein modelling by satisfaction of spatial restraints

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18594881

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1007/S00894-008-0327-7

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

PubMed publication ID

18594881

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18594881

retrieved

5 December 2017

ResearchGate publication ID

5258267

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