Spatial organization of the core region of yeast TFIIIB-DNA complexes (Q33958845)

30 July 2017

title

Spatial organization of the core region of yeast TFIIIB-DNA complexes (English)

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30 July 2017

J Persinger

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30 July 2017

S M Sengupta

series ordinal

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30 July 2017

B Bartholomew

series ordinal

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30 July 2017

language of work or name

English

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publication date

1 July 1999

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Molecular and Cellular Biology

30 July 2017

published in

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30 July 2017

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30 July 2017

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30 July 2017

page(s)

5218-5234

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Functional and structural organization of Brf, the TFIIB-related component of the RNA polymerase III transcription initiation complex

30 July 2017

cites work

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5 July 2018

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Polymerase (Pol) III TATA box-binding protein (TBP)-associated factor Brf binds to a surface on TBP also required for activated Pol II transcription

5 July 2018

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Architecture of protein and DNA contacts within the TFIIIB-DNA complex

5 July 2018

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Bidirectional binding of the TATA box binding protein to the TATA box

5 July 2018

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The 2.1-A crystal structure of an archaeal preinitiation complex: TATA-box-binding protein/transcription factor (II)B core/TATA-box

5 July 2018

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Mapping the contacts of yeast TFIIIB and RNA polymerase III at various distances from the major groove of DNA by DNA photoaffinity labeling

5 July 2018

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Probing the protein-DNA contacts of a yeast RNA polymerase III transcription complex in a crude extract: solid phase synthesis of DNA photoaffinity probes containing a novel photoreactive deoxycytidine analog

5 July 2018

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Mapping of catalytic residues in the RNA polymerase active center

5 July 2018

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Crystal structure of a human TATA box-binding protein/TATA element complex

5 July 2018

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Protein-RNA interactions in the active center of transcription elongation complex

5 July 2018

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Crystal structure of a yeast TFIIA/TBP/DNA complex

5 July 2018

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Architecture of a yeast U6 RNA gene promoter

5 July 2018

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TFIIIC relieves repression of U6 snRNA transcription by chromatin

5 July 2018

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Orientation and topography of RNA polymerase III in transcription complexes

5 July 2018

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Three in one and one in three: it all depends on TBP.

5 July 2018

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Co-crystal structure of TBP recognizing the minor groove of a TATA element

5 July 2018

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Crystal structure of a yeast TBP/TATA-box complex

5 July 2018

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New photolabeling and crosslinking methods

5 July 2018

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TBP, a universal eukaryotic transcription factor?

5 July 2018

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TBP-TAF complexes: selectivity factors for eukaryotic transcription

5 July 2018

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TFIIIB placement on a yeast U6 RNA gene in vivo is directed primarily by TFIIIC rather than by sequence-specific DNA contacts

5 July 2018

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Crystal structure of a TFIIB-TBP-TATA-element ternary complex

5 July 2018

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Cloning, expression, and function of TFC5, the gene encoding the B" component of the Saccharomyces cerevisiae RNA polymerase III transcription factor TFIIIB.

5 July 2018

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Transcription factor IIIB generates extended DNA interactions in RNA polymerase III transcription complexes on tRNA genes

5 July 2018

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Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa

5 July 2018

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S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase III, while TFIIIA and TFIIIC are assembly factors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

Transcription of a yeast U6 snRNA gene requires a polymerase III promoter element in a novel position

5 July 2018

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Analysis of structure-function relationships of yeast TATA box binding factor TFIID.

5 July 2018

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The subunit structure of Saccharomyces cerevisiae transcription factor IIIC probed with a novel photocrosslinking reagent

5 July 2018

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Saccharomyces cerevisiae transcription factors IIIB and IIIC bend the DNA of a tRNA(Gln) gene

5 July 2018

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Two components of Saccharomyces cerevisiae transcription factor IIIB (TFIIIB) are stereospecifically located upstream of a tRNA gene and interact with the second-largest subunit of TFIIIC.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

Two essential components of the Saccharomyces cerevisiae transcription factor TFIIIB: transcription and DNA-binding properties

5 July 2018

1 reference

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Mapping of a contact for the RNA 3' terminus in the largest subunit of RNA polymerase

5 July 2018

1 reference

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Kinetic analysis of yeast TFIID-TATA box complex formation suggests a multi-step pathway

5 July 2018

1 reference

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The role of the TATA-binding protein in the assembly and function of the multisubunit yeast RNA polymerase III transcription factor, TFIIIB.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

Bending of the Saccharomyces cerevisiae 5S rRNA gene in transcription factor complexes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

Determination of lysine residues affinity labeled in the active site of yeast RNA polymerase II(B) by mutagenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

A yeast TFIIB-related factor involved in RNA polymerase III transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

Affinity, stability and polarity of binding of the TATA binding protein governed by flexure at the TATA Box.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

Alternative outcomes in assembly of promoter complexes: the roles of TBP and a flexible linker in placing TFIIIB on tRNA genes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

The symmetry of the yeast U6 RNA gene's TATA box and the orientation of the TATA-binding protein in yeast TFIIIB.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84364

An asymmetric model for the nucleosome: a binding site for linker histones inside the DNA gyres

29 October 2018

1 reference

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Contributions of the TATA box sequence to rate-limiting steps in transcription initiation by RNA polymerase II

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Specific Chemical Cleavage in High Yield at the Amino Peptide Bonds of Cysteine and Cystine Residues

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Studies of the functional topography of Escherichia coli RNA polymerase. A method for localization of the sites of affinity labelling

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Duality of TBP, the universal transcription factor

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DNA bending is an important component of site-specific recognition by the TATA binding protein

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12 December 2020

Identifiers

DOI

10.1128/MCB.19.7.5218

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30 July 2017

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30 July 2017

1 reference