Comparative genomics of proteins involved in RNA nucleocytoplasmic export (Q33790486)

29 July 2017

title

Comparative genomics of proteins involved in RNA nucleocytoplasmic export (English)

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29 July 2017

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Mariana Serpeloni

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29 July 2017

Newton M Vidal

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29 July 2017

Samuel Goldenberg

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29 July 2017

Andréa R Avila

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29 July 2017

Federico G Hoffmann

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29 July 2017

publication date

11 January 2011

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29 July 2017

published in

BMC Evolutionary Biology

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29 July 2017

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29 July 2017

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Comparative genomic evidence for a complete nuclear pore complex in the last eukaryotic common ancestor.

29 July 2017

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28 July 2018

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28 July 2018

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Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes

28 July 2018

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28 July 2018

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Evidence for a shared nuclear pore complex architecture that is conserved from the last common eukaryotic ancestor

28 July 2018

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28 July 2018

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Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

28 July 2018

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28 July 2018

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Origin of the nucleus and Ran-dependent transport to safeguard ribosome biogenesis in a chimeric cell

28 July 2018

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The evolution of core proteins involved in microRNA biogenesis

28 July 2018

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Mutually exclusive interactions drive handover of mRNA from export adaptors to TAP

28 July 2018

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28 July 2018

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Arx1 is a nuclear export receptor for the 60S ribosomal subunit in yeast.

28 July 2018

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SAGA and a novel Drosophila export complex anchor efficient transcription and mRNA export to NPC.

28 July 2018

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Centrin1 is required for organelle segregation and cytokinesis in Trypanosoma brucei

28 July 2018

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Nuclear export of ribosomal 60S subunits by the general mRNA export receptor Mex67-Mtr2.

28 July 2018

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Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants

28 July 2018

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A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

28 July 2018

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SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope

28 July 2018

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Comparative genomics and structural biology of the molecular innovations of eukaryotes

28 July 2018

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Introns and the origin of nucleus-cytosol compartmentalization

28 July 2018

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The two tempos of nuclear pore complex evolution: highly adapting proteins in an ancient frozen structure

28 July 2018

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Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

28 July 2018

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Cotranscriptional mRNP assembly: from the DNA to the nuclear pore

28 July 2018

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Complex spliceosomal organization ancestral to extant eukaryotes

28 July 2018

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Comparative genomics, evolution and origins of the nuclear envelope and nuclear pore complex

28 July 2018

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Yeast centrin Cdc31 is linked to the nuclear mRNA export machinery

28 July 2018

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Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery

28 July 2018

1 reference

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PAUSED, a putative exportin-t, acts pleiotropically in Arabidopsis development but is dispensable for viability

28 July 2018

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28 July 2018

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Nab2p and the Thp1p-Sac3p complex functionally interact at the interface between transcription and mRNA metabolism

28 July 2018

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28 July 2018

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The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

TREX is a conserved complex coupling transcription with messenger RNA export

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Comparative genomics and evolution of proteins involved in RNA metabolism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

The evolutionarily conserved region of the U snRNA export mediator PHAX is a novel RNA-binding domain that is essential for U snRNA export

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Nuclear export of 60s ribosomal subunits depends on Xpo1p and requires a nuclear export sequence-containing factor, Nmd3p, that associates with the large subunit protein Rpl10p

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

PHAX, a mediator of U snRNA nuclear export whose activity is regulated by phosphorylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

An aminoacylation-dependent nuclear tRNA export pathway in yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Nuclear export of the small ribosomal subunit requires the ran-GTPase cycle and certain nucleoporins.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

TAP, the human homolog of Mex67p, mediates CTE-dependent RNA export from the nucleus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Mex67p, a novel factor for nuclear mRNA export, binds to both poly(A)+ RNA and nuclear pores

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Cloning and characterization of LOS1, a Saccharomyces cerevisiae gene that affects tRNA splicing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Basic local alignment search tool

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Nucleocytoplasmic transport: taking an inventory

28 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Exporting RNA from the nucleus to the cytoplasm

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Harnessing genomics to explore the processes and evolution of mRNA export.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Small GTPases and the evolution of the eukaryotic cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

MicroRNAs: genomics, biogenesis, mechanism, and function

21 January 2018

2 references

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032688

Identification of microRNA in the protist Trichomonas vaginalis

30 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

The nuclear tRNA aminoacylation-dependent pathway may be the principal route used to export tRNA from the nucleus in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

tRNA actively shuttles between the nucleus and cytosol in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Nmd3p is a Crm1p-dependent adapter protein for nuclear export of the large ribosomal subunit

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Reengineering ribosome export.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Insights into a CRM1-mediated RNA-nuclear export pathway in Trypanosoma cruzi

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Inositol hexakisphosphate and Gle1 activate the DEAD-box protein Dbp5 for nuclear mRNA export

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Control of mRNA export and translation termination by inositol hexakisphosphate requires specific interaction with Gle1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

RanBP1 is crucial for the release of RanGTP from importin β-related nuclear transport factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-7

Inhibition of active nuclear transport is an intrinsic trigger of programmed cell death in trypanosomatids

21 January 2018

1 reference

12 December 2020

Ran-binding protein 1 (RanBP1) forms a ternary complex with Ran and karyopherin beta and reduces Ran GTPase-activating protein (RanGAP) inhibition by karyopherin beta

1 reference

12 December 2020

Connecting the transcription site to the nuclear pore: a multi-tether process that regulates gene expression

1 reference

12 December 2020

Complex formation among the RNA export proteins Nup98, Rae1/Gle2, and TAP

1 reference

12 December 2020

Asymmetric distribution of nuclear pore complexes and the cytoplasmic localization of beta2-tubulin mRNA in Chlamydomonas reinhardtii

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-11-7

1 reference

Dimensions Publication ID

29 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-11-7

9 September 2019

1 reference

29 July 2017

1 reference