A c-Myc regulatory subnetwork from human transposable element sequences. (Q33773609)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

A c-Myc regulatory subnetwork from human transposable element sequences (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

author

Leonardo Mariño-Ramírez

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Jianrong Wang

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Nathan J Bowen

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

I King Jordan

series ordinal

1 reference

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7 February 2020

publication date

21 July 2009

1 reference

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7 February 2020

1 reference

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7 February 2020

volume

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7 February 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

page(s)

1831-1839

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

Evolution of the mammalian transcription factor binding repertoire via transposable elements

7 February 2020

cites work

1 reference

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Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA

4 July 2018

1 reference

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Transposable elements and the evolution of regulatory networks

4 July 2018

1 reference

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Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53.

4 July 2018

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Ancient exaptation of a CORE-SINE retroposon into a highly conserved mammalian neuronal enhancer of the proopiomelanocortin gene

4 July 2018

1 reference

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Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies

4 July 2018

1 reference

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Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

4 July 2018

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Global mapping of c-Myc binding sites and target gene networks in human B cells

4 July 2018

1 reference

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Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor

4 July 2018

1 reference

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Genetics: Junk DNA as an evolutionary force

4 July 2018

1 reference

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A family of conserved noncoding elements derived from an ancient transposable element

4 July 2018

1 reference

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Transposable element derived DNaseI-hypersensitive sites in the human genome.

4 July 2018

1 reference

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Functional noncoding sequences derived from SINEs in the mammalian genome

4 July 2018

1 reference

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A distal enhancer and an ultraconserved exon are derived from a novel retroposon

4 July 2018

1 reference

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A large family of ancient repeat elements in the human genome is under strong selection

4 July 2018

1 reference

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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

4 July 2018

1 reference

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Whole genome computational comparative genomics: A fruitful approach for ascertaining Alu insertion polymorphisms

4 July 2018

1 reference

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4 July 2018

1 reference

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Transposable elements donate lineage-specific regulatory sequences to host genomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Reverse engineering of regulatory networks in human B cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Evolution and distribution of RNA polymerase II regulatory sites from RNA polymerase III dependant mobile Alu elements

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

A gene atlas of the mouse and human protein-encoding transcriptomes

4 July 2018

1 reference

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ONCOMINE: a cancer microarray database and integrated data-mining platform

4 July 2018

1 reference

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Mobile elements: drivers of genome evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Detection of functional DNA motifs via statistical over-representation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

The UCSC Table Browser data retrieval tool

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

An integrated database of genes responsive to the Myc oncogenic transcription factor: identification of direct genomic targets

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Origin of a substantial fraction of human regulatory sequences from transposable elements

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

c-MYC: more than just a matter of life and death

4 July 2018

1 reference

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4 July 2018

1 reference

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Initial sequencing and analysis of the human genome

4 July 2018

1 reference

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The Sequence of the Human Genome

4 July 2018

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4 July 2018

1 reference

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Alu repeats and human disease

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Mobile elements inserted in the distant past have taken on important functions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Selection on the protein-coding genes of the TBE1 family of transposable elements in the ciliates Oxytricha fallax and O. trifallax

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

DNA sequence insertion and evolutionary variation in gene regulation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

4 July 2018

1 reference

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An ancient provirus has imposed androgen regulation on the adjacent mouse sex-limited protein gene

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2850603

Conserved fragments of transposable elements in intergenic regions: evidence for widespread recruitment of MIR- and L2-derived sequences within the mouse and human genomes

4 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19763338

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transposable elements as a significant source of transcription regulating signals

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19763338

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1039/B908494K

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

PubMed publication ID

19763338

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19763338%20AND%20SRC:MED&resulttype=core&format=json