Nonnative Interactions in Coupled Folding and Binding Processes of Intrinsically Disordered Proteins (Q33747704)

29 July 2017

title

Nonnative interactions in coupled folding and binding processes of intrinsically disordered proteins (English)

1 reference

29 July 2017

Nonnative Interactions in Coupled Folding and Binding Processes of Intrinsically Disordered Proteins (English)

1 reference

10.1371/JOURNAL.PONE.0015375

DOI

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0015375

protein tertiary structure

27 August 2024

main subject

protein folding

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

27 August 2024

Zhirong Liu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

27 August 2024

Yongqi Huang

1 reference

29 July 2017

language of work or name

English

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publication date

4 November 2010

1 reference

full work available at URL

29 July 2017

https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0015375&type=printable

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21079758/?tool=EBI

27 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21079758/pdf/?tool=EBI

27 August 2024

file format

Portable Document Format

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

https://europepmc.org/articles/PMC2973977

27 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

https://europepmc.org/articles/PMC2973977?pdf=render

27 August 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21079758

http://dx.plos.org/10.1371/journal.pone.0015375

27 August 2024

1 reference

10.1371/JOURNAL.PONE.0015375

DOI

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0015375

27 August 2024

1 reference

29 July 2017

1 reference

29 July 2017

1 reference

29 July 2017

page(s)

e15375

1 reference

Creative Commons Attribution 4.0 International

29 July 2017

start time

4 November 2010

1 reference

April 2022 Public Data File from Crossref

copyrighted

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cites work

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28 July 2018

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28 July 2018

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28 July 2018

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Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Identification of a collapsed intermediate with non-native long-range interactions on the folding pathway of a pair of Fyn SH3 domain mutants by NMR relaxation dispersion spectroscopy

28 July 2018

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Single-molecule dynamics reveals cooperative binding-folding in protein recognition

28 July 2018

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How do biomolecular systems speed up and regulate rates?

28 July 2018

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Change of the unbinding mechanism upon a mutation: a molecular dynamics study of an antibody-hapten complex

28 July 2018

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28 July 2018

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The effects of nonnative interactions on protein folding rates: theory and simulation

28 July 2018

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Dramatic acceleration of protein folding by stabilization of a nonnative backbone conformation

28 July 2018

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Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

28 July 2018

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Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

28 July 2018

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Validity of Gō models: comparison with a solvent-shielded empirical energy decomposition

28 July 2018

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Unspecific hydrophobic stabilization of folding transition states

28 July 2018

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Speeding molecular recognition by using the folding funnel: the fly-casting mechanism

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Perturbations of the denatured state ensemble: modeling their effects on protein stability and folding kinetics

28 July 2018

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28 July 2018

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Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity

28 July 2018

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Phosphorylated CREB binds specifically to the nuclear protein CBP

28 July 2018

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Theoretical Studies of Protein Folding

28 July 2018

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Funnels, pathways, and the energy landscape of protein folding: a synthesis

28 July 2018

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Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

21 January 2018

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Desolvation is a likely origin of robust enthalpic barriers to protein folding.

21 January 2018

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A survey of flexible protein binding mechanisms and their transition states using native topology based energy landscapes

21 January 2018

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Thermodynamics and kinetics of non-native interactions in protein folding: a single point mutant significantly stabilizes the N-terminal domain of L9 by modulating non-native interactions in the denatured state

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Mutational analysis demonstrates that specific electrostatic interactions can play a key role in the denatured state ensemble of proteins

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Antagonism, non-native interactions and non-two-state folding in S6 revealed by double-mutant cycle analysis

21 January 2018

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The effect of increasing the stability of non-native interactions on the folding landscape of the bacterial immunity protein Im9.

21 January 2018

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Determination of the folding transition states of barnase by using PhiI-value-restrained simulations validated by double mutant PhiIJ-values

21 January 2018

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Rapid formation of non-native contacts during the folding of HPr revealed by real-time photo-CIDNP NMR and stopped-flow fluorescence experiments

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Speeding protein folding beyond the G(o) model: how a little frustration sometimes helps

21 January 2018

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Theoretical and experimental demonstration of the importance of specific nonnative interactions in protein folding

21 January 2018

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The limited role of nonnative contacts in the folding pathways of a lattice protein.

21 January 2018

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Coupling of folding and binding for unstructured proteins

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Fly-casting in protein-DNA binding: frustration between protein folding and electrostatics facilitates target recognition

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Intrinsic protein disorder and interaction promiscuity are widely associated with dosage sensitivity.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Solvation effects and driving forces for protein thermodynamic and kinetic cooperativity: how adequate is native-centric topological modeling?

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Molecular Principles of the Interactions of Disordered Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Roles of non-native hydrogen-bonding interaction in helix-coil transition of a single polypeptide as revealed by comparison between Gō-like and non-Gō models.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2973977

Im7 folding mechanism: misfolding on a path to the native state

30 October 2018

1 reference

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Enhancement of Association Rates by Nonspecific Binding to DNA and Cell Membranes

30 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015375

Smoothing molecular interactions: The “kinetic buffer” effect of intrinsically disordered proteins

21 January 2018

1 reference

12 December 2020

Protein sliding along DNA: dynamics and structural characterization

1 reference

12 December 2020

Nonnative electrostatic interactions can modulate protein folding: molecular dynamics with a grain of salt

1 reference

12 December 2020

Improved Gō-like models demonstrate the robustness of protein folding mechanisms towards non-native interactions

1 reference

12 December 2020

Solvation and desolvation effects in protein folding: native flexibility, kinetic cooperativity and enthalpic barriers under isostability conditions

1 reference

12 December 2020

Exploring the mechanism of flexible biomolecular recognition with single molecule dynamics

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0015375

Identifiers

DOI

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference