Use of homologous and heterologous gene expression profiling tools to characterize transcription dynamics during apple fruit maturation and ripening (Q33727265)

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English	Use of homologous and heterologous gene expression profiling tools to characterize transcription dynamics during apple fruit maturation and ripening	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

Use of homologous and heterologous gene expression profiling tools to characterize transcription dynamics during apple fruit maturation and ripening (English)

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Europe PubMed Central

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28 July 2017

Stefano Musacchi

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Stefano Musacchi

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Fabrizio Costa

1

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Europe PubMed Central

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28 July 2017

Rob Alba

2

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28 July 2017

Henk Schouten

3

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28 July 2017

Valeria Soglio

4

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28 July 2017

Luca Gianfranceschi

5

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28 July 2017

Sara Serra

6

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28 July 2017

Silviero Sansavini

8

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28 July 2017

Guglielmo Costa

9

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28 July 2017

Zhangjun Fei

10

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28 July 2017

James Giovannoni

11

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28 July 2017

publication date

25 October 2010

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28 July 2017

BMC Plant Biology

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28 July 2017

10

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28 July 2017

229

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28 July 2017

The genome of the domesticated apple (Malus × domestica Borkh.)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Gene ontology analysis for RNA-seq: accounting for selection bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Sequencing technologies - the next generation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Analysis of gene expression data using BRB-ArrayTools.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Transcriptome profiling of ripening nectarine (Prunus persica L. Batsch) fruit treated with 1-MCP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Heterologous microarray experiments allow the identification of the early events associated with potato tuber cold sweetening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Global gene expression analysis of apple fruit development from the floral bud to ripe fruit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Identification of genes with potential roles in apple fruit development and biochemistry through large-scale statistical analysis of expressed sequence tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Genes expressed during the development and ripening of watermelon fruit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Analyses of expressed sequence tags from apple.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Microarray analysis of the transcriptome as a stepping stone towards understanding biological systems: practical considerations and perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Tomato Expression Database (TED): a suite of data presentation and analysis tools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Comprehensive EST analysis of tomato and comparative genomics of fruit ripening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Genetic regulation of fruit development and ripening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Developmental gene regulation during tomato fruit ripening and in-vitro sepal morphogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

GEPAS: A web-based resource for microarray gene expression data analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Ethylene biosynthesis and action in tomato: a model for climacteric fruit ripening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Use of genomics tools to isolate key ripening genes and analyse fruit maturation in tomato

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

MOLECULAR BIOLOGY OF FRUIT MATURATION AND RIPENING.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

A hierarchical unsupervised growing neural network for clustering gene expression patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Parthenocarpic apple fruit production conferred by transposon insertion mutations in a MADS-box transcription factor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

The regulation of 1-aminocyclopropane-1-carboxylic acid synthase gene expression during the transition from system-1 to system-2 ethylene synthesis in tomato

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

The tomato ethylene receptors NR and LeETR4 are negative regulators of ethylene response and exhibit functional compensation within a multigene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

Expression of a divergent expansin gene is fruit-specific and ripening-regulated

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

21 June 2018

MdERFs, two ethylene-response factors involved in apple fruit ripening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Transcript profiling of transcription factor genes during silique development in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Constitutive expression of EIL-like transcription factor partially restores ripening in the ethylene-insensitive Nr tomato mutant

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Simultaneous transgenic suppression of LePG and LeExp1 influences fruit texture and juice viscosity in a fresh market tomato variety

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Arabidopsis microarrays identify conserved and differentially expressed genes involved in shoot growth and development from distantly related plant species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Recent advances in fruit development and ripening: an overview

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Plant biology. MADS-box genes reach maturity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco

1 reference

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Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

An ethylene-inducible component of signal transduction encoded by never-ripe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

ESTs, cDNA microarrays, and gene expression profiling: tools for dissecting plant physiology and development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3095317

30 October 2018

Utilization of tomato microarrays for comparative gene expression analysis in the Solanaceae

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microarrays: Determining the Balance of Cellular Transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microarray analysis of apple gene expression engaged in early fruit development

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of the Colorless non-ripening mutation on cell wall biochemistry and gene expression during tomato fruit development and ripening

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ethylene regulation of fruit softening and cell wall disassembly in Charentais melon

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression profiling using cDNA microarrays

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genomics approach reveals that aroma production in apple is controlled by ethylene predominantly at the final step in each biosynthetic pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Temporal sequence of cell wall disassembly in rapidly ripening melon fruit

1 reference

https://pubmed.ncbi.nlm.nih.gov/20973957

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1186/1471-2229-10-229

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Europe PubMed Central

PubMed publication ID

28 July 2017

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pubmed-PMC3095317

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PMC publication ID

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Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

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Europe PubMed Central

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28 July 2017

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