Benchmarking multi-rate codon models (Q33640206)

28 July 2017

title

Benchmarking multi-rate codon models (English)

1 reference

Sergei L. Kosakovsky Pond

28 July 2017

Konrad Scheffler

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object named as

Sergei Kosakovsky Pond

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Spencer V Muse

1 reference

28 July 2017

Wayne Delport

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28 July 2017

Mike B Gravenor

series ordinal

1 reference

28 July 2017

language of work or name

English

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publication date

21 July 2010

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28 July 2017

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28 July 2017

1 reference

28 July 2017

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28 July 2017

page(s)

e11587

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Creative Commons Attribution 4.0 International

28 July 2017

start time

21 July 2010

1 reference

April 2022 Public Data File from Crossref

copyrighted

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cites work

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Correcting the bias of empirical frequency parameter estimators in codon models

21 June 2018

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21 June 2018

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Investigating protein-coding sequence evolution with probabilistic codon substitution models

21 June 2018

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Bayesian analysis of amino acid substitution models

21 June 2018

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Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates

21 June 2018

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An empirical codon model for protein sequence evolution

21 June 2018

1 reference

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Identification of physicochemical selective pressure on protein encoding nucleotide sequences

21 June 2018

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21 June 2018

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Datamonkey: rapid detection of selective pressure on individual sites of codon alignments

21 June 2018

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Not so different after all: a comparison of methods for detecting amino acid sites under selection

21 June 2018

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Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

21 June 2018

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A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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A genetic algorithm approach to detecting lineage-specific variation in selection pressure.

21 June 2018

1 reference

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Solvent exposure imparts similar selective pressures across a range of yeast proteins.

21 January 2018

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A combined empirical and mechanistic codon model.

21 January 2018

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A simple hierarchical approach to modeling distributions of substitution rates.

21 January 2018

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Detecting Site-Specific Physicochemical Selective Pressures: Applications to the Class I HLA of the Human Major Histocompatibility Complex and the SRK of the Plant Sporophytic Self-Incompatibility System

21 January 2018

1 reference

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Evolutionary model selection with a genetic algorithm: a case study using stem RNA.

21 January 2018

1 reference

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A new approach to clustering the amino acids

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20657773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0011587

1 reference

release_k3h7hwwa65b3tggccgmrd3b56m

28 July 2017

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1 reference

Fatcat

https://api.fatcat.wiki/v0/release/k3h7hwwa65b3tggccgmrd3b56m

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

2908124

1 reference

28 July 2017

1 reference