Protein rates of evolution are predicted by double-strand break events, independent of crossing-over rates (Q33633576)

28 July 2017

title

Protein rates of evolution are predicted by double-strand break events, independent of crossing-over rates (English)

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28 July 2017

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28 July 2017

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28 July 2017

language of work or name

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2 September 2009

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Genome Biology and Evolution

28 July 2017

published in

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28 July 2017

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28 July 2017

page(s)

340-349

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Hypermutability of damaged single-strand DNA formed at double-strand breaks and uncapped telomeres in yeast Saccharomyces cerevisiae.

28 July 2017

cites work

1 reference

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Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution.

21 June 2018

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21 June 2018

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Elevated levels of expression associated with regions of the Drosophila genome that lack crossing over

21 June 2018

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21 June 2018

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Mutagenesis from meiotic recombination is not a primary driver of sequence divergence between Saccharomyces species

21 June 2018

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High-resolution mapping of meiotic crossovers and non-crossovers in yeast

21 June 2018

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No effect of recombination on the efficacy of natural selection in primates

21 June 2018

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Mapping meiotic single-strand DNA reveals a new landscape of DNA double-strand breaks in Saccharomyces cerevisiae

21 June 2018

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Recombination rate and protein evolution in yeast

21 June 2018

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The Hill-Robertson effect: evolutionary consequences of weak selection and linkage in finite populations

21 June 2018

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Still stratus not altocumulus: further evidence against the date/party hub distinction

21 June 2018

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Reduced efficacy of selection in regions of the Drosophila genome that lack crossing over

21 June 2018

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Stratus not altocumulus: a new view of the yeast protein interaction network

21 June 2018

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Evolutionary and physiological importance of hub proteins

21 June 2018

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Recombination enhances protein adaptation in Drosophila melanogaster

21 June 2018

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Genome-wide map of nucleosome acetylation and methylation in yeast

21 June 2018

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Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast

21 June 2018

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21 June 2018

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Evolutionary rate depends on number of protein-protein interactions independently of gene expression level: response

21 June 2018

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 June 2018

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Protein evolution and codon usage bias on the neo-sex chromosomes of Drosophila miranda.

21 June 2018

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Evidence for co-evolution of gene order and recombination rate

21 June 2018

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Linkage limits the power of natural selection in Drosophila

21 June 2018

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EVOLUTION OF SEXRESOLVING THE PARADOX OF SEX AND RECOMBINATION

21 June 2018

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The connection between transcription and genomic instability

21 June 2018

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The correlation between intron length and recombination in drosophila. Dynamic equilibrium between mutational and selective forces.

21 June 2018

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Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae

21 June 2018

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Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila.

21 June 2018

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Dissecting the regulatory circuitry of a eukaryotic genome

21 June 2018

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Clustering of meiotic double-strand breaks on yeast chromosome III

21 June 2018

1 reference

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Characterization of the yeast transcriptome

21 June 2018

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Unbiased estimation of the rates of synonymous and nonsynonymous substitution

21 June 2018

1 reference

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DNA synthesis errors associated with double-strand-break repair

21 June 2018

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

21 June 2018

1 reference

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The evolutionary advantage of recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

21 June 2018

1 reference

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Effects of linkage on rates of molecular evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Reduced effectiveness of selection caused by a lack of recombination.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Histone H3 lysine 4 trimethylation marks meiotic recombination initiation sites.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Mating system and recombination affect molecular evolution in four Triticeae species.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Evolution of protein-coding genes in Drosophila.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

A single determinant dominates the rate of yeast protein evolution

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Positive correlation between evolutionary rate and recombination rate in Drosophila genes with male-biased expression.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Association of Mre11p with double-strand break sites during yeast meiosis

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Intron size and natural selection

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Genomic function (communication arising): Rate of evolution and gene dispensability

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

Does the Recombination Rate Affect the Efficiency of Purifying Selection? The Yeast Genome Provides a Partial Answer

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817428

The effect of linkage on limits to artificial selection

30 October 2018

1 reference

12 December 2020

Meiosis-induced double-strand break sites determined by yeast chromatin structure

1 reference

12 December 2020

Mapping of meiotic single-stranded DNA reveals double-stranded-break hotspots near centromeres and telomeres

1 reference

12 December 2020

Is optimal gene order impossible?

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVP033

1 reference

28 July 2017

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28 July 2017

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