3D-DART: a DNA structure modelling server (Q33439390)

26 July 2017

title

3D-DART: a DNA structure modelling server (English)

1 reference

26 July 2017

Alexandre M J J Bonvin

1 reference

26 July 2017

Marc van Dijk

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language of work or name

English

0 references

publication date

5 May 2009

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26 July 2017

published in

Nucleic Acids Research

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26 July 2017

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26 July 2017

issue

Web Server issue

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26 July 2017

page(s)

W235-9

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HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets

26 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Information-driven protein-DNA docking using HADDOCK: it is a matter of flexibility

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Axis curvature and ligand induced bending in the CAP-DNA oligomers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

HADDOCK: a protein-protein docking approach based on biochemical or biophysical information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Protein-DNA interactions: A structural analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Two distinct modes of protein-induced bending in DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

DNA binding and cleavage by the nuclear intron-encoded homing endonuclease I-PpoI

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

DNA bending: the prevalence of kinkiness and the virtues of normality

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

DNA recognition and bending

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Eukaryotic transcription factor-DNA complexes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Definitions and nomenclature of nucleic acid structure parameters

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKP287

Nucleic acid modeling tool (NAMOT): an interactive graphic tool for modeling nucleic acid structures.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703913

Rod models of DNA: sequence-dependent anisotropic elastic modelling of local bending phenomena

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19417072

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Structural bioinformatics of DNA: a web-based tool for the analysis of molecular dynamics results and structure prediction

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19417072

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKP287

1 reference

26 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

26 July 2017

1 reference