The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools (Q33294761)

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English	The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

25 July 2017

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools (English)

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PubMed publication ID

25 July 2017

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Hookeun Lee

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Ruedi Aebersold

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Ruedi Aebersold

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25 July 2017

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Jimmy K Eng

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James S Eddes

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Parag Mallick

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John Klimek

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Laura Hohmann

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Amelia Peterson

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Amelia Peterson

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Simon Letarte

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Philip R Gafken

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Philip R Gafken

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Reto Ossola

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Alexander Schmidt

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Alexander Schmidt

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author name string

Jennifer Jackson

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Jonathan E Katz

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Daniel B Martin

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publication date

21 August 2007

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25 July 2017

Journal of Proteome Research

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25 July 2017

7

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25 July 2017

1

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25 July 2017

96-103

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25 July 2017

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Protein identification by tandem mass spectrometry and sequence database searching

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Mass spectrometry and protein analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Ultra fast trypsin digestion of proteins by high intensity focused ultrasound

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Computational analysis of shotgun proteomics data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

A common open representation of mass spectrometry data and its application to proteomics research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Standard mixtures for proteome studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

A statistical model for identifying proteins by tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

A microcapillary trap cartridge-microcapillary high-performance liquid chromatography electrospray ionization emitter device capable of peptide tandem mass spectrometry at the attomole level on an ion trap mass spectrometer with automated routine op

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Mass spectrometry-based proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Proteome analysis by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Direct analysis of protein complexes using mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

21 June 2018

Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

31 October 2018

Qscore: an algorithm for evaluating SEQUEST database search results

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577160

31 October 2018

The implications of proteolytic background for shotgun proteomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/17711323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17711323

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/PR070244J

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

ResearchGate publication ID

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