Mechanisms of protein folding (Q31944289)

5 July 2017

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title

Mechanisms of protein folding (English)

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5 July 2017

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Grantcharova V

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5 July 2017

Alm EJ

series ordinal

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5 July 2017

Baker D

series ordinal

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5 July 2017

Horwich AL

series ordinal

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5 July 2017

publication date

1 February 2001

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Current Opinion in Structural Biology

5 July 2017

published in

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5 July 2017

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5 July 2017

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5 July 2017

page(s)

70-82

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Contact order, transition state placement and the refolding rates of single domain proteins.

5 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Experiment and theory highlight role of native state topology in SH3 folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Conservation of rapid two-state folding in mesophilic, thermophilic and hyperthermophilic cold shock proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The folding kinetics and thermodynamics of the Fyn-SH3 domain.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

First principles prediction of protein folding rates

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https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

A simple model for calculating the kinetics of protein folding from three-dimensional structures

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Characterizing transition states in protein folding: an essential step in the puzzle

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Transition state heterogeneity in GCN4 coiled coil folding studied by using multisite mutations and crosslinking

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Preformed secondary structure drives the association reaction of GCN4-p1, a model coiled-coil system

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The energy landscape of a fast-folding protein mapped by Ala-->Gly substitutions

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Contribution of a buried hydrogen bond to lambda repressor folding kinetics

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

A breakdown of symmetry in the folding transition state of protein L

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Critical role of beta-hairpin formation in protein G folding.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Native protein sequences are close to optimal for their structures

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Stabilisation of α-helices by site-directed mutagenesis reveals the importance of secondary structure in the transition state for acylphosphatase folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

From snapshot to movie: phi analysis of protein folding transition states taken one step further

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Obligatory steps in protein folding and the conformational diversity of the transition state

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https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Long-range order in the src SH3 folding transition state

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Circularization changes the folding transition state of the src SH3 domain

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Conformational analysis of peptides corresponding to beta-hairpins and a beta-sheet that represent the entire sequence of the alpha-spectrin SH3 domain.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Three-dimensional solution structure of PsaE from the cyanobacterium Synechococcus sp. strain PCC 7002, a photosystem I protein that shows structural homology with SH3 domains

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Solution structure and DNA-binding properties of a thermostable protein from the archaeon Sulfolobus solfataricus

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The crystal structure of the asymmetric GroEL–GroES–(ADP)7 chaperonin complex

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The chaperonin ATPase cycle: mechanism of allosteric switching and movements of substrate-binding domains in GroEL.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The crystal structure of the bacterial chaperonin GroEL at 2.8 A

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Distinct actions of cis and trans ATP within the double ring of the chaperonin GroEL

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Characterization of the active intermediate of a GroEL-GroES-mediated protein folding reaction

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Binding, encapsulation and ejection: substrate dynamics during a chaperonin-assisted folding reaction

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

GroEL-GroES cycling: ATP and nonnative polypeptide direct alternation of folding-active rings

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Catalysis of amide proton exchange by the molecular chaperones GroEL and SecB

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Conformation of GroEL-bound alpha-lactalbumin probed by mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Significant hydrogen exchange protection in GroEL-bound DHFR is maintained during iterative rounds of substrate cycling

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https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Native-like structure of a protein-folding intermediate bound to the chaperonin GroEL.

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https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Chaperonin function: folding by forced unfolding

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https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Destabilization of the complete protein secondary structure on binding to the chaperone GroEL.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Two conformational states of β-lactamase bound to GroEL: a biophysical characterization 1 1Edited by A. R. Fersht

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Thermodynamic partitioning model for hydrophobic binding of polypeptides by GroEL. II. GroEL recognizes thermally unfolded mature beta-lactamase.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

A thermodynamic coupling mechanism for GroEL-mediated unfolding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The chaperonin GroEL binds to late-folding non-native conformations present in native Escherichia coli and murine dihydrofolate reductases

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

A thermodynamic coupling mechanism can explain the GroEL-mediated acceleration of the folding of barstar

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Chaperonins can Catalyse the Reversal of Early Aggregation Steps when a Protein Misfolds

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Multivalent binding of nonnative substrate proteins by the chaperonin GroEL.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The crystal structure of a GroEL/peptide complex: plasticity as a basis for substrate diversity

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Residues in chaperonin GroEL required for polypeptide binding and release

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

A structural model for GroEL-polypeptide recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The chaperonin GroEL binds a polypeptide in an .alpha.-helical conformation

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

NMR analysis of the binding of a rhodanese peptide to a minichaperone in solution

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Basis of Substrate Binding by the Chaperonin GroEL†

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Secondary structure forming propensity coupled with amphiphilicity is an optimal motif in a peptide or protein for association with chaperonin 60 (GroEL)

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Identification of in vivo substrates of the chaperonin GroEL

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

GroEL accelerates the refolding of hen lysozyme without changing its folding mechanism.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

GroEL-mediated protein folding proceeds by multiple rounds of binding and release of nonnative forms

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Dynamics of the chaperonin ATPase cycle: implications for facilitated protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Catalysis, commitment and encapsulation during GroE-mediated folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Analysis of GroE-assisted folding under nonpermissive conditions

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Cytochrome b562 folding triggered by electron transfer: approaching the speed limit for formation of a four-helix-bundle protein

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Folding kinetics of a fluorescent variant of monomeric lambda repressor.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Submillisecond folding of the peripheral subunit-binding domain 1 1Edited by P. E. Wright

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Cytochrome c folding triggered by electron transfer

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Rapid folding with and without populated intermediates in the homologous four-helix proteins Im7 and Im9.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The formation of a native-like structure containing eight conserved hydrophobic residues is rate limiting in two-state protein folding of ACBP

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Folding kinetics of villin 14T, a protein domain with a central beta-sheet and two hydrophobic cores

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Global analysis of the effects of temperature and denaturant on the folding and unfolding kinetics of the N-terminal domain of the protein L9.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Folding and stability of a tryptophan-containing mutant of ubiquitin

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

High-energy channeling in protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Surface point mutations that significantly alter the structure and stability of a protein's denatured state

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Kinetics of Folding of the IgG Binding Domain of Peptostreptoccocal Protein L

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Folding pathway of FKBP12 and characterisation of the transition state

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Slow Cooperative Folding of a Small Globular Protein HPr

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Remarkably slow folding of a small protein

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Slow folding of muscle acylphosphatase in the absence of intermediates.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Folding studies of immunoglobulin-like β-sandwich proteins suggest that they share a common folding pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Different folding transition states may result in the same native structure

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The folding of an immunoglobulin-like Greek key protein is defined by a common-core nucleus and regions constrained by topology

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Folding of circular and permuted chymotrypsin inhibitor 2: retention of the folding nucleus

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Mapping the interactions present in the transition state for unfolding/folding of FKBP12.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

Structure of the transition state for folding of the 129 aa protein CheY resembles that of a smaller protein, CI-2

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

The folding pathway of the cell-cycle regulatory protein p13suc1: clues for the mechanism of domain swapping

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

P22 Arc Repressor: Transition State Properties Inferred from Mutational Effects on the Rates of Protein Unfolding and Refolding

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0959-440X%2800%2900176-7

7 January 2021

10.1016/S0959-440X(00)00176-7

Identifiers

DOI

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5 July 2017

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