QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data (Q31104515)

7 November 2017

QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data (English)

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7 November 2017

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7 November 2017

Jennifer M Taylor

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7 November 2017

Ghazala Mirza

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7 November 2017

Helen Butler

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7 November 2017

Penny Clouston

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7 November 2017

Anne S Bassett

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7 November 2017

Anneke Seller

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7 November 2017

Christopher C Holmes

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7 November 2017

Jiannis Ragoussis

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7 November 2017

language of work or name

English

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publication date

6 March 2007

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7 November 2017

Nucleic Acids Research

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7 November 2017

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7 November 2017

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7 November 2017

2013-2025

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A comprehensive analysis of common copy-number variations in the human genome

7 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Global variation in copy number in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

PLASQ: a generalized linear model-based procedure to determine allelic dosage in cancer cells from SNP array data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Inferring loss-of-heterozygosity from unpaired tumors using high-density oligonucleotide SNP arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

High-resolution mapping of DNA copy alterations in human chromosome 22 using high-density tiling oligonucleotide arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

BioHMM: a heterogeneous hidden Markov model for segmenting array CGH data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

CARAT: a novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Analysis and visualization of chromosomal abnormalities in SNP data with SNPscan

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Structural variation in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Human and mouse oligonucleotide-based array CGH.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Allele-specific amplification in cancer revealed by SNP array analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

High-resolution identification of chromosomal abnormalities using oligonucleotide arrays containing 116,204 SNPs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

The new cytogenetics: blurring the boundaries with molecular biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Homozygous deletions and chromosome amplifications in human lung carcinomas revealed by single nucleotide polymorphism array analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Molecular karyotyping using an SNP array for genomewide genotyping.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

High-resolution analysis of DNA copy number using oligonucleotide microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Representational oligonucleotide microarray analysis: a high-resolution method to detect genome copy number variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Delineation of two distinct 6p deletion syndromes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Further evidence for the involvement of human chromosome 6p24 in the aetiology of orofacial clefting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

Distal 6p deletion syndrome: a report of a case with anterior chamber eye anomaly and review of published reports

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874617

High-resolution analysis of chromosomal imbalances using the Affymetrix 10K SNP genotyping chip

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

A genome-wide scalable SNP genotyping assay using microarray technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

Whole-genome genotyping with the single-base extension assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

Integrating copy number polymorphisms into array CGH analysis using a robust HMM.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

A tutorial on hidden Markov models and selected applications in speech recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

Refined genotype-phenotype correlations in cases of chromosome 6p deletion syndromes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

Schizophrenia in an adult with 6p25 deletion syndrome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM076

Evidence of a locus for orofacial clefting on human chromosome 6p24 and STS content map of the region

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17341461

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Microarray-based genome investigation: molecular karyotyping or segmental aneuploidy profiling?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17341461

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM076

1 reference

7 November 2017

1 reference

7 November 2017

PubMed publication ID

17341461

1 reference