GRACOMICS: software for graphical comparison of multiple results with omics data (Q30936104)

11 September 2017

GRACOMICS: software for graphical comparison of multiple results with omics data (English)

1 reference

11 September 2017

Minseok Seo

1 reference

11 September 2017

Joon Yoon

series ordinal

1 reference

11 September 2017

Taesung Park

series ordinal

1 reference

11 September 2017

language of work or name

English

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publication date

1 April 2015

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11 September 2017

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11 September 2017

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11 September 2017

256

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Creative Commons Attribution 4.0 International

11 September 2017

start time

1 April 2015

1 reference

April 2022 Public Data File from Crossref

copyrighted

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describes a project that uses

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

IGENT: efficient entropy based algorithm for genome-wide gene-gene interaction analysis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

21 June 2018

1 reference

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A novel method to identify high order gene-gene interactions in genome-wide association studies: gene-based MDR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Optimal unified approach for rare-variant association testing with application to small-sample case-control whole-exome sequencing studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Integrating factor analysis and a transgenic mouse model to reveal a peripheral blood predictor of breast tumors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Rare-variant association testing for sequencing data with the sequence kernel association test

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Testing for an unusual distribution of rare variants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Propensity score-based nonparametric test revealing genetic variants underlying bipolar disorder

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Differential expression analysis for sequence count data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Applications of new sequencing technologies for transcriptome analysis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

PLINK: a tool set for whole-genome association and population-based linkage analyses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Sequence, "subtle" alternative splicing and expression of the CYYR1 (cysteine/tyrosine-rich 1) mRNA in human neuroendocrine tumors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Genome-wide association studies for common diseases and complex traits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Nonparametric methods for identifying differentially expressed genes in microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

A comparative review of statistical methods for discovering differentially expressed genes in replicated microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

Significance analysis of microarrays applied to the ionizing radiation response

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

dbSNP: the NCBI database of genetic variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

The International HapMap Project

21 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1461-0

FARVAT: a family-based rare variant association test

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1461-0

Expression of interleukin-9 in nasal natural killer/T-cell lymphoma cell lines and patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1461-0

Identifying Potential Regions of Copy Number Variation for Bipolar Disorder.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1461-0

The NBP Negative Binomial Model for Assessing Differential Gene Expression from RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1461-0

Prognostic utility of glycosyltransferase expression in breast cancer.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387734

10.1186/S12864-015-1461-0

25 November 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

11 September 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s12864-015-1461-0

1 reference

11 September 2017

PubMed publication ID

25887412

1 reference