Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data (Q30887013)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

title

Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

single-nucleotide polymorphism

17 November 2019

main subject

1 reference

1 reference

linkage disequilibrium

1 reference

Na Li

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

Matthew Stephens

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

language of work or name

English

0 references

publication date

1 December 2003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

number of pages

1 reference

inferred from page(s)

published in

Genetics

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

volume

165

1 reference

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17 November 2019

issue

1 reference

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17 November 2019

page(s)

2213-2233

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

Distribution of recombination crossovers and the origin of haplotype blocks: the interplay of population history, recombination, and mutation

17 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

A coalescent-based method for detecting and estimating recombination from gene sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Generating samples under a Wright-Fisher neutral model of genetic variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Two-locus sampling distributions and their application

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Estimating recombination rates from population genetic data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Bayesian analysis of haplotypes for linkage disequilibrium mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Gene conversion and different population histories may explain the contrast between polymorphism and linkage disequilibrium levels

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Linkage disequilibrium in humans: models and data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

A New Statistical Method for Haplotype Reconstruction from Population Data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Maximum likelihood estimation of recombination rates from population data.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Inference of population structure using multilocus genotype data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Bayesian fine-scale mapping of disease loci, by hidden Markov models.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

High resolution analysis of haplotype diversity and meiotic crossover in the human TAP2 recombination hotspot

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Estimation of population parameters and recombination rates from single nucleotide polymorphisms.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Recombinational and mutational hotspots within the human lipoprotein lipase gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Assessment of linkage disequilibrium by the decay of haplotype sharing, with application to fine-scale genetic mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Haplotype structure and population genetic inferences from nucleotide-sequence variation in human lipoprotein lipase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

DNA sequence diversity in a 9.7-kb region of the human lipoprotein lipase gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Out of Africa and back again: nested cladistic analysis of human Y chromosome variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Archaic African and Asian lineages in the genetic ancestry of modern humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

A coalescent estimator of the population recombination rate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Ancestral inference from samples of DNA sequences with recombination.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

The sampling theory of selectively neutral alleles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Statistical properties of the number of recombination events in the history of a sample of DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Inference of haplotypes from PCR-amplified samples of diploid populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Reciprocal crossover asymmetry and meiotic drive in a human recombination hot spot.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Complex high-resolution linkage disequilibrium and haplotype patterns of single-nucleotide polymorphisms in 2.5 Mb of sequence on human chromosome 21.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

High-resolution haplotype structure in the human genome

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462870

Haplotype tagging for the identification of common disease genes

25 November 2018

1 reference

12 December 2020

Properties of a neutral allele model with intragenic recombination

1 reference

12 December 2020

Estimating the recombination parameter of a finite population model without selection

1 reference

12 December 2020

Using the variance of pairwise differences to estimate the recombination rate

1 reference

12 December 2020

Prospects for whole-genome linkage disequilibrium mapping of common disease genes

1 reference

12 December 2020

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

PubMed publication ID

14704198

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14704198%20AND%20SRC:MED&resulttype=core&format=json