A high-performance computing toolset for relatedness and principal component analysis of SNP data (Q30573123)

14 August 2017

A high-performance computing toolset for relatedness and principal component analysis of SNP data (English)

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principal component analysis

14 August 2017

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Xiuwen Zheng

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Stephanie M. Gogarten

Stephanie M Gogarten

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Bruce S Weir

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David Levine

1 reference

14 August 2017

Jess Shen

series ordinal

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14 August 2017

Cathy Laurie

series ordinal

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14 August 2017

language of work or name

English

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publication date

11 October 2012

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14 August 2017

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14 August 2017

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14 August 2017

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14 August 2017

3326-3328

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GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

The variant call format and VCFtools

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

A map of human genome variation from population-scale sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

Quality control and quality assurance in genotypic data for genome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

New approaches to population stratification in genome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

The Gene, Environment Association Studies consortium (GENEVA): maximizing the knowledge obtained from GWAS by collaboration across studies of multiple conditions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

Case-control association testing in the presence of unknown relationships

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

A unified association analysis approach for family and unrelated samples correcting for stratification.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

PLINK: a tool set for whole-genome association and population-based linkage analyses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

Principal components analysis corrects for stratification in genome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

Maximum-likelihood estimation of relatedness.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

Population stratification and spurious allelic association

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3519454

10.1093/BIOINFORMATICS/BTS606

20 June 2018

Identifiers

DOI

1 reference

journals/bioinformatics/ZhengLSGLW12

14 August 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

14 August 2017

PubMed publication ID

23060615

1 reference