Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys. (Q30373776)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

title

Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys (English)

1 reference

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18 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Ioannis Filippis

1 reference

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18 January 2020

Henning Stehr

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Michael Lappe

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

publication date

8 December 2008

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18 January 2020

published in

BMC Structural Biology

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18 January 2020

volume

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18 January 2020

page(s)

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

18 January 2020

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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26 November 2018

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26 November 2018

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Statistical potentials extracted from protein structures: how accurate are they?

26 November 2018

1 reference

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Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

26 November 2018

1 reference

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Principles of helix-helix packing in proteins: the helical lattice superposition model.

26 November 2018

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Improved alignment of weakly homologous protein sequences using structural information.

26 November 2018

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Criteria that discriminate between native proteins and incorrectly folded models

26 November 2018

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12 December 2020

Folding behaviors of lattice model proteins with three kinds of contact potentials

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12 December 2020

Identification of native protein folds amongst a large number of incorrect models. The calculation of low energy conformations from potentials of mean force

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12 December 2020

Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins

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12 December 2020

Recognizing native folds by the arrangement of hydrophobic and polar residues

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12 December 2020

Polarity as a criterion in protein design

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12 December 2020

A multibody, whole-residue potential for protein structures, with testing by Monte Carlo simulated annealing

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12 December 2020

Identifiers

DOI

10.1186/1472-6807-8-53

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

18 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PubMed publication ID

19063740

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19063740%20AND%20SRC:MED&resulttype=core&format=json