Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis. (Q30370720)

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10 January 2020

title

Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18632749%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

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protein structure prediction

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computational biology

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10 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18632749%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Majid Masso

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21 June 2017

Iosif I Vaisman

series ordinal

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21 June 2017

language of work or name

English

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publication date

16 July 2008

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10 January 2020

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volume

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issue

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page(s)

2002-2009

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The quickhull algorithm for convex hulls

10 January 2020

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21 January 2018

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Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

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A neural-network-based method for predicting protein stability changes upon single point mutations.

21 January 2018

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Predicting protein stability changes from sequences using support vector machines

21 January 2018

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I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure

21 January 2018

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Prediction of protein stability changes for single-site mutations using support vector machines

21 January 2018

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Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution

21 January 2018

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The early stage of folding of villin headpiece subdomain observed in a 200-nanosecond fully solvated molecular dynamics simulation

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Data mining in bioinformatics using Weka

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Neural network-based prediction of mutation-induced protein stability changes in Staphylococcal nuclease at 20 residue positions

21 January 2018

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Stability changes upon mutation of solvent-accessible residues in proteins evaluated by database-derived potentials.

21 January 2018

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Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

21 January 2018

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Prediction of protein thermostability with a direction- and distance-dependent knowledge-based potential

21 January 2018

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Knowledge acquisition and development of accurate rules for predicting protein stability changes

21 January 2018

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Prediction of protein mutant stability using classification and regression tool

21 January 2018

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

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Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models

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Effective energy functions for protein structure prediction.

21 January 2018

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Comprehensive mutagenesis of HIV-1 protease: a computational geometry approach.

21 January 2018

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Computational mutagenesis studies of protein structure-function correlations.

21 January 2018

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The network of sequence flow between protein structures.

21 January 2018

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Comparison of database potentials and molecular mechanics force fields

21 January 2018

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Desk-top analysis of the structural stability of various point mutations introduced into ribonuclease H.

21 January 2018

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Structural analysis and prediction of protein mutant stability using distance and torsion potentials: role of secondary structure and solvent accessibility.

21 January 2018

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21 January 2018

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Contribution of the hydrophobic effect to protein stability: analysis based on simulations of the Ile-96----Ala mutation in barnase

21 January 2018

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Delaunay tessellation of proteins: four body nearest-neighbor propensities of amino acid residues

21 January 2018

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Prediction of the stability of protein mutants based on structural environment-dependent amino acid substitution and propensity tables

21 January 2018

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Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction

21 January 2018

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10.1093/BIOINFORMATICS/BTN353

21 January 2018

Identifiers

DOI

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journals/bioinformatics/MassoV08

10 January 2020

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18632749%20AND%20SRC:MED&resulttype=core&format=json